RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CNN2Q99439 309 aaKnown RBP2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR51M1Q9H341 326 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 RANBP3Q9H6Z4 567 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 SPACA1Q9HBV2 294 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 PRSS16Q9NQE7 514 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 PXMP2Q9NR77 195 aa2.34□□□□□ -2.03
HMGB1P49-201ENST00000418882 MN1Q10571 1320 aaPredicted RBP2.34□□□□□ -2.04
HMGB1P49-201ENST00000418882 GPR179Q6PRD1 2367 aa2.34□□□□□ -2.04
HMGB1P49-201ENST00000418882 A0A0J9YYE9 177 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 OR5B21A6NL26 309 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 HSBP1L1C9JCN9 74 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 YKT6O15498 198 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 TRBC1P01850 177 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 BGLAPP02818 100 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 CCDC172P0C7W6 258 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 IL12AP29459 219 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 SLC1A2P43004 574 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 UQCRFS1P47985 274 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 NPBWR2P48146 333 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 UBE2AP49459 152 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 CRISP1P54107 249 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 KCNJ2P63252 427 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 TRDNQ13061 729 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 HSP90B2PQ58FF3 399 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 SOHLH1Q5JUK2 328 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 VAX1Q5SQQ9 334 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 CCDC50Q8IVM0 306 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 MICU2Q8IYU8 434 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 STPG2Q8N412 459 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 MS4A15Q8N5U1 240 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 RNF182Q8N6D2 247 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 CEP112Q8N8E3 955 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 SMARCD2Q92925 531 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 CLCC1Q96S66 551 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 LLPHQ9BRT6 129 aaKnown RBP2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 FAIM2Q9BWQ8 316 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 CHID1Q9BWS9 393 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 PRRG3Q9BZD7 231 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 IL22Q9GZX6 179 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 ILKAPQ9H0C8 392 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 ING2Q9H160 280 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 GBA3Q9H227 469 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 NOX3Q9HBY0 568 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 MRPL47Q9HD33 250 aaKnown RBP2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 CCNB1IP1Q9NPC3 277 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 SIRT7Q9NRC8 400 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 CHRAC1Q9NRG0 131 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZNF222Q9UK12 451 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 GMEB1Q9Y692 573 aa2.33□□□□□ -2.04
HMGB1P49-201ENST00000418882 NEURL4Q96JN8 1562 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 SMCO3A2RU48 225 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 PSMD11O00231 422 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 RAB29O14966 203 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 CETN3O15182 167 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 OXTP01178 125 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 UBCP0CG48 685 aaKnown RBP2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 HPGDP15428 266 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 BCKDHBP21953 392 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 OMGP23515 440 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 GTF2E2P29084 291 aaKnown RBP2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 CFHR2P36980 270 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 NSG1P42857 185 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 RCAN2Q14206 197 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 HSDL1Q3SXM5 330 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 Q5W150 140 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 TWF2Q6IBS0 349 aaKnown RBP2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 TTC23LQ6PF05 361 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 CNIH2Q6PI25 160 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 SLC25A48Q6ZT89 311 aaKnown RBP2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 NCCRP1Q6ZVX7 275 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 SSX9Q7RTT3 188 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 FAM122BQ7Z309 247 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 CD302Q8IX05 232 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 C8orf31Q8N9H6 132 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 FNDC5Q8NAU1 212 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 NDNFQ8TB73 568 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 SUN5Q8TC36 379 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZBED3Q96IU2 234 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZNF578Q96N58 590 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 ZNF641Q96N77 438 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 TSSK3Q96PN8 268 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 SLC29A1Q99808 456 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 SPIN2AQ99865 258 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 SPIN2BQ9BPZ2 258 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 CHAC1Q9BUX1 264 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 TREM1Q9NP99 234 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 LZTFL1Q9NQ48 299 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 LYARQ9NX58 379 aaKnown RBP2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 TMCO1Q9UM00 188 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 RBMX2Q9Y388 322 aaKnown RBP2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 BZW2Q9Y6E2 419 aaKnown RBP2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 CEMIPQ8WUJ3 1361 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 WDR62O43379 1518 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 NISCHQ9Y2I1 1504 aa2.32□□□□□ -2.04
HMGB1P49-201ENST00000418882 COL27A1Q8IZC6 1860 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 DOCK8Q8NF50 2099 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 A0A1B0GVI7 797 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 A0A1B0GVX0 72 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 SMCO2A6NFE2 343 aa2.31□□□□□ -2.04
HMGB1P49-201ENST00000418882 IQCF5A8MTL0 148 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms