RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TCRBV5S2A0A599 114 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 DCTN6O00399 190 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 RP2O75695 350 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 GPANK1O95872 356 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 ACHEP22303 614 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 IGFBP5P24593 272 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 MMP15P51511 669 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 HMGA2P52926 109 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 PPP1CBP62140 327 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 MRPS11P82912 194 aaKnown RBP15.1■□□□□ 0.01
LSM5-204ENST00000409909 ZNF718Q3SXZ3 478 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 MBNL2Q5VZF2 373 aaKnown RBP15.1■□□□□ 0.01
LSM5-204ENST00000409909 FAM166AQ6J272 317 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 C1orf94Q6P1W5 598 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 VASH1Q7L8A9 365 aaPredicted RBP15.1■□□□□ 0.01
LSM5-204ENST00000409909 CCDC197Q8NCU1 140 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 IPCEF1Q8WWN9 437 aaPredicted RBP15.1■□□□□ 0.01
LSM5-204ENST00000409909 HPS1Q92902 700 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 C4orf45Q96LM5 186 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 SAMD8Q96LT4 415 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 ZNF275Q9NSD4 429 aaPredicted RBP15.1■□□□□ 0.01
LSM5-204ENST00000409909 CDC42EP3Q9UKI2 254 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 TMCC3Q9ULS5 477 aa15.1■□□□□ 0.01
LSM5-204ENST00000409909 WNT9BO14905 357 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 SGCEO43556 437 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 TGFAP01135 160 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 COX5BP10606 129 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 TMEM33P57088 247 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 LSM6P62312 80 aaKnown RBP15.09■□□□□ 0.01
LSM5-204ENST00000409909 MS4A2Q01362 244 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 SCRN3Q0VDG4 424 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 KCNMB1Q16558 191 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 MOGQ16653 247 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 PCGF3Q3KNV8 242 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 PGBD2Q6P3X8 592 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 SNX33Q8WV41 574 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 SLC7A6Q92536 515 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 C1orf159Q96HA4 380 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 BEX2Q9BXY8 128 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 RACGAP1Q9H0H5 632 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 NKIRAS2Q9NYR9 191 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 ASH2LQ9UBL3 628 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 LYVE1Q9Y5Y7 322 aa15.09■□□□□ 0.01
LSM5-204ENST00000409909 IGLV1-36A0A0B4J1U3 117 aa15.08■□□□□ 0
LSM5-204ENST00000409909 ARPC3O15145 178 aa15.08■□□□□ 0
LSM5-204ENST00000409909 DOK2O60496 412 aa15.08■□□□□ 0
LSM5-204ENST00000409909 CDC14BO60729 498 aa15.08■□□□□ 0
LSM5-204ENST00000409909 KRT36O76013 467 aa15.08■□□□□ 0
LSM5-204ENST00000409909 FAM157CP0CG43 387 aa15.08■□□□□ 0
LSM5-204ENST00000409909 HIST1H1CP16403 213 aaKnown RBP15.08■□□□□ 0
LSM5-204ENST00000409909 CALB2P22676 271 aa15.08■□□□□ 0
LSM5-204ENST00000409909 GCH1P30793 250 aa15.08■□□□□ 0
LSM5-204ENST00000409909 SLC6A6P31641 620 aa15.08■□□□□ 0
LSM5-204ENST00000409909 MAGEA2P43356 314 aa15.08■□□□□ 0
LSM5-204ENST00000409909 GPR6P46095 362 aaPredicted RBP15.08■□□□□ 0
LSM5-204ENST00000409909 HTR5AP47898 357 aa15.08■□□□□ 0
LSM5-204ENST00000409909 TSPAN31Q12999 210 aa15.08■□□□□ 0
LSM5-204ENST00000409909 AQP6Q13520 282 aa15.08■□□□□ 0
LSM5-204ENST00000409909 CCNIQ14094 377 aa15.08■□□□□ 0
LSM5-204ENST00000409909 TSTQ16762 297 aaKnown RBP15.08■□□□□ 0
LSM5-204ENST00000409909 CCDC92Q53HC0 331 aaPredicted RBP15.08■□□□□ 0
LSM5-204ENST00000409909 LEG1Q6P5S2 330 aa15.08■□□□□ 0
LSM5-204ENST00000409909 UNQ6126/PRO20091Q6UXV3 157 aa15.08■□□□□ 0
LSM5-204ENST00000409909 C1orf174Q8IYL3 243 aa15.08■□□□□ 0
LSM5-204ENST00000409909 OR6V1Q8N148 313 aa15.08■□□□□ 0
LSM5-204ENST00000409909 ARHGAP24Q8N264 748 aa15.08■□□□□ 0
LSM5-204ENST00000409909 OR4C15Q8NGM1 316 aa15.08■□□□□ 0
LSM5-204ENST00000409909 OR4K13Q8NH42 304 aa15.08■□□□□ 0
LSM5-204ENST00000409909 GNPDA2Q8TDQ7 276 aa15.08■□□□□ 0
LSM5-204ENST00000409909 NMNAT3Q96T66 252 aa15.08■□□□□ 0
LSM5-204ENST00000409909 IFT27Q9BW83 186 aa15.08■□□□□ 0
LSM5-204ENST00000409909 POFUT1Q9H488 388 aa15.08■□□□□ 0
LSM5-204ENST00000409909 ELOVL3Q9HB03 270 aa15.08■□□□□ 0
LSM5-204ENST00000409909 SRA1Q9HD15 236 aaKnown RBP15.08■□□□□ 0
LSM5-204ENST00000409909 KLHL21Q9UJP4 597 aa15.08■□□□□ 0
LSM5-204ENST00000409909 NDRG4Q9ULP0 352 aaKnown RBP15.08■□□□□ 0
LSM5-204ENST00000409909 KCNS2Q9ULS6 477 aa15.08■□□□□ 0
LSM5-204ENST00000409909 B9D1Q9UPM9 204 aa15.08■□□□□ 0
LSM5-204ENST00000409909 OR6C6A6NF89 314 aa15.07■□□□□ 0
LSM5-204ENST00000409909 ZSCAN5BA6NJL1 495 aa15.07■□□□□ 0
LSM5-204ENST00000409909 RER1O15258 196 aa15.07■□□□□ 0
LSM5-204ENST00000409909 ABHD16AO95870 558 aa15.07■□□□□ 0
LSM5-204ENST00000409909 IGHV1-46P01743 117 aa15.07■□□□□ 0
LSM5-204ENST00000409909 GAAP10253 952 aa15.07■□□□□ 0
LSM5-204ENST00000409909 CRABP1P29762 137 aa15.07■□□□□ 0
LSM5-204ENST00000409909 IFNGR2P38484 337 aa15.07■□□□□ 0
LSM5-204ENST00000409909 CRYBB2P43320 205 aa15.07■□□□□ 0
LSM5-204ENST00000409909 ZNF81P51508 661 aa15.07■□□□□ 0
LSM5-204ENST00000409909 PPP1R8Q12972 351 aaKnown RBP15.07■□□□□ 0
LSM5-204ENST00000409909 TRIM25Q14258 630 aaKnown RBP15.07■□□□□ 0
LSM5-204ENST00000409909 MEP1BQ16820 701 aa15.07■□□□□ 0
LSM5-204ENST00000409909 MTX3Q5HYI7 312 aa15.07■□□□□ 0
LSM5-204ENST00000409909 FAM120AOSQ5T036 256 aa15.07■□□□□ 0
LSM5-204ENST00000409909 ZNF770Q6IQ21 691 aaPredicted RBP15.07■□□□□ 0
LSM5-204ENST00000409909 LCN8Q6JVE9 175 aa15.07■□□□□ 0
LSM5-204ENST00000409909 ZNF620Q6ZNG0 422 aa15.07■□□□□ 0
LSM5-204ENST00000409909 IL17RELQ6ZVW7 336 aa15.07■□□□□ 0
LSM5-204ENST00000409909 DHFR2Q86XF0 187 aa15.07■□□□□ 0
LSM5-204ENST00000409909 OR9Q2Q8NGE9 314 aa15.07■□□□□ 0
LSM5-204ENST00000409909 BTBD10Q9BSF8 475 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms