RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 MXRA5Q9NR99 2828 aa12.42□□□□□ -0.42
NIF3L1-205ENST00000409588 COL6A5A8TX70 2615 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 FBN1P35555 2871 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 LRP5LA4QPB2 252 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 UNC119BA6NIH7 251 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 ARPC3O15145 178 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 IDH3BO43837 385 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 GADD45GO95257 159 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 IGFBP5P24593 272 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 ZNF81P51508 661 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 CDH15P55291 814 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 SLC3A1Q07837 685 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 AQP6Q13520 282 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 ENDOGQ14249 297 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 KCNMB1Q16558 191 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 HFEQ30201 348 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 RFX4Q33E94 735 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 CLDN22Q8N7P3 220 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 NPEPL1Q8NDH3 523 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 AKR7LQ8NHP1 331 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 KLF14Q8TD94 323 aaPredicted RBP12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 RSRC1Q96IZ7 334 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 DCLRE1CQ96SD1 692 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 FUZQ9BT04 418 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 ZNF275Q9NSD4 429 aaPredicted RBP12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 TMEFF2Q9UIK5 374 aaPredicted RBP12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 KLHL21Q9UJP4 597 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 ADAM18Q9Y3Q7 739 aa12.41□□□□□ -0.42
NIF3L1-205ENST00000409588 RTTNQ86VV8 2226 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 IGHV1-69-2A0A0G2JMI3 117 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 LYNX1G3V0Z9 82 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 PPIHO43447 177 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 SGCEO43556 437 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 SLC16A7O60669 478 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 RP2O75695 350 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 SEMG1P04279 462 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 FABP3P05413 133 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 LYNX1P0DP58 116 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 ZNF26P17031 533 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 GSTM3P21266 225 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 WNT5AP41221 380 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 RGS6P49758 472 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 MMP15P51511 669 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 HMGA2P52926 109 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 PPP1CBP62140 327 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 GNGT1P63211 74 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 CCL8P80075 99 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 SCGB2A2Q13296 93 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 KRR1Q13601 381 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 MESTQ5EB52 335 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 MTX3Q5HYI7 312 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 ZNF101Q8IZC7 436 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 RNF148Q8N7C7 305 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 ICA1LQ8NDH6 482 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 GJC3Q8NFK1 279 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 ABHD4Q8TB40 342 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 RAB1CQ92928 201 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 ELMOD3Q96FG2 381 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 TIMD4Q96H15 378 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 OR2J1Q9GZK6 312 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 OR51B6Q9H340 312 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 SAP30LQ9HAJ7 183 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 IER3IP1Q9Y5U9 82 aa12.4□□□□□ -0.42
NIF3L1-205ENST00000409588 ANK3Q12955 4377 aaKnown RBP12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 TRBV4-1A0A0J9YWV2 114 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 TPD52L2O43399 206 aaKnown RBP12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 CTLA4P16410 223 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 FPR3P25089 353 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 SLC6A6P31641 620 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 MAGEB1P43366 347 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 ERVS71-1P61550 626 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 SEC23BQ15437 767 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 RPL13AP3Q6NVV1 102 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 ZNF774Q6NX45 483 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 C1orf94Q6P1W5 598 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 PEG10Q86TG7 708 aaKnown RBP12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 GLCCI1Q86VQ1 547 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 MEX3DQ86XN8 651 aaKnown RBP12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 OR5L1Q8NGL2 311 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 OR52J3Q8NH60 311 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 SLC25A40Q8TBP6 338 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 PTP4A1Q93096 173 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 YIPF5Q969M3 257 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 SYT4Q9H2B2 425 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 MUC13Q9H3R2 512 aa12.39□□□□□ -0.43
NIF3L1-205ENST00000409588 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.38□□□□□ -0.436e-8■■□□□ 12.2
NIF3L1-205ENST00000409588 RNF212BA8MTL3 300 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 CLDN25C9JDP6 229 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 OR10H3O60404 316 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 NCR1O76036 304 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 ABHD16AO95870 558 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 CD55P08174 381 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 MMP16P51512 607 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 MXRA7P84157 204 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 TRIP10Q15642 601 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 CR1LQ2VPA4 569 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 LIPNQ5VXI9 398 aa12.38□□□□□ -0.43
NIF3L1-205ENST00000409588 DEFB107AQ8IZN7 70 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms