RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 BBS1Q8NFJ9 593 aa16.63■□□□□ 0.25
HOXA9-202ENST00000396345 GJC3Q8NFK1 279 aa16.63■□□□□ 0.25
HOXA9-202ENST00000396345 OR2AJ1Q8NGZ0 328 aa16.63■□□□□ 0.25
HOXA9-202ENST00000396345 TMEM163Q8TC26 289 aa16.63■□□□□ 0.25
HOXA9-202ENST00000396345 FBXW5Q969U6 566 aa16.63■□□□□ 0.25
HOXA9-202ENST00000396345 IL4I1Q96RQ9 567 aa16.63■□□□□ 0.25
HOXA9-202ENST00000396345 MBOAT4Q96T53 435 aa16.63■□□□□ 0.25
HOXA9-202ENST00000396345 LIME1Q9H400 295 aa16.63■□□□□ 0.25
HOXA9-202ENST00000396345 CDH20Q9HBT6 801 aa16.63■□□□□ 0.25
HOXA9-202ENST00000396345 C8orf4Q9NR00 106 aa16.63■□□□□ 0.25
HOXA9-202ENST00000396345 NKX1-2Q9UD57 310 aaPredicted RBP16.63■□□□□ 0.25
HOXA9-202ENST00000396345 ANKRD17O75179 2603 aaKnown RBP16.63■□□□□ 0.25
HOXA9-202ENST00000396345 CASQ2O14958 399 aaPredicted RBP16.62■□□□□ 0.25
HOXA9-202ENST00000396345 DOK2O60496 412 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 CCL2P13500 99 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 GSTT1P30711 240 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 GGT2P36268 569 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 ENTPD1P49961 510 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 RPS7P62081 194 aaKnown RBP16.62■□□□□ 0.25
HOXA9-202ENST00000396345 EFNB1P98172 346 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 HGFACQ04756 655 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 SLC34A1Q06495 639 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 SLC35D3Q5M8T2 416 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 SLC18B1Q6NT16 456 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 CORO6Q6QEF8 472 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 B3GLCTQ6Y288 498 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 LINC00346Q8IVM7 164 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 PACRGLQ8N7B6 248 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 ZNF611Q8N823 705 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 HRASLS5Q96KN8 279 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 WDR76Q9H967 626 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 PLEK2Q9NYT0 353 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 CYB5R1Q9UHQ9 305 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 EDARQ9UNE0 448 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 COMMD3-BMI1R4GMX3 469 aa16.62■□□□□ 0.25
HOXA9-202ENST00000396345 RAI1Q7Z5J4 1906 aaPredicted RBP16.61■□□□□ 0.25
HOXA9-202ENST00000396345 E9PQ18 207 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 ZNF593O00488 134 aaPredicted RBP16.61■□□□□ 0.25
HOXA9-202ENST00000396345 RER1O15258 196 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 TMCC2O75069 709 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 COX5BP10606 129 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 SLC2A5P22732 501 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 GDI2P50395 445 aaKnown RBP16.61■□□□□ 0.25
HOXA9-202ENST00000396345 HIST1H3AP68431 136 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 GALK2Q01415 458 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 APOFQ13790 326 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 CCDC92Q53HC0 331 aaPredicted RBP16.61■□□□□ 0.25
HOXA9-202ENST00000396345 OGFRL1Q5TC84 451 aaPredicted RBP16.61■□□□□ 0.25
HOXA9-202ENST00000396345 HIST2H3PS2Q5TEC6 136 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 PAMR1Q6UXH9 720 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 C20orf204Q6ZNR8 217 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 HIST2H3AQ71DI3 136 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 VASH1Q7L8A9 365 aaPredicted RBP16.61■□□□□ 0.25
HOXA9-202ENST00000396345 ZMYND19Q96E35 227 aaPredicted RBP16.61■□□□□ 0.25
HOXA9-202ENST00000396345 POM121L2Q96KW2 1035 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 RDH12Q96NR8 316 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 DHRS9Q9BPW9 319 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 RNPEPL1Q9HAU8 725 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 IMPAD1Q9NX62 359 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 SMPD3Q9NY59 655 aaPredicted RBP16.61■□□□□ 0.25
HOXA9-202ENST00000396345 H2AFY2Q9P0M6 372 aaPredicted RBP16.61■□□□□ 0.25
HOXA9-202ENST00000396345 GDF2Q9UK05 429 aaPredicted RBP16.61■□□□□ 0.25
HOXA9-202ENST00000396345 NDRG4Q9ULP0 352 aaKnown RBP16.61■□□□□ 0.25
HOXA9-202ENST00000396345 SPEF1Q9Y4P9 236 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 RTTNQ86VV8 2226 aa16.61■□□□□ 0.25
HOXA9-202ENST00000396345 LOC100509620A0A075B734 347 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 C5orf49A4QMS7 147 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 CCNOP22674 350 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 NR4A1P22736 598 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 RPS27P42677 84 aaKnown RBP16.6■□□□□ 0.25
HOXA9-202ENST00000396345 HTR5AP47898 357 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 FABP6P51161 128 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 RAB35Q15286 201 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 KRT80Q6KB66 452 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 TMEM154Q6P9G4 183 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 BCDIN3DQ7Z5W3 292 aaKnown RBP16.6■□□□□ 0.25
HOXA9-202ENST00000396345 ERI1Q8IV48 349 aaKnown RBP16.6■□□□□ 0.25
HOXA9-202ENST00000396345 PAQR4Q8N4S7 273 aaPredicted RBP16.6■□□□□ 0.25
HOXA9-202ENST00000396345 NUP37Q8NFH4 326 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 OR8J1Q8NGP2 316 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 OR1F12Q8NHA8 337 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 FAM81AQ8TBF8 368 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 SMAP2Q8WU79 429 aaPredicted RBP16.6■□□□□ 0.25
HOXA9-202ENST00000396345 INTS14Q96SY0 518 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 MARCH7Q9H992 704 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 ST6GALNAC2Q9UJ37 374 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 GMPPBQ9Y5P6 360 aa16.6■□□□□ 0.25
HOXA9-202ENST00000396345 OR6C6A6NF89 314 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 SYNGR3O43761 229 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 RAF1P04049 648 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 SPARCP09486 303 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 SNTB2Q13425 540 aaKnown RBP16.59■□□□□ 0.25
HOXA9-202ENST00000396345 PCK2Q16822 640 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 TEX30Q5JUR7 227 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 ELFN2Q5R3F8 820 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 LCN1P1Q5VSP4 162 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 AADACL4Q5VUY2 407 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 NXNL2Q5VZ03 156 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 ZNF544Q6NX49 715 aa16.59■□□□□ 0.25
HOXA9-202ENST00000396345 VHLLQ6RSH7 139 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms