RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ZNF578Q96N58 590 aaPredicted RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 NECAB3Q96P71 396 aaPredicted RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 ZMIZ1Q9ULJ6 1067 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 RCL1Q9Y2P8 373 aaKnown RBP8.01□□□□□ -1.13
RTN4-206ENST00000394611 KIAA2026Q5HYC2 2103 aa8.01□□□□□ -1.13
RTN4-206ENST00000394611 A0A1W2PPE2 198 aa8□□□□□ -1.13
RTN4-206ENST00000394611 CPED1A4D0V7 1026 aa8□□□□□ -1.13
RTN4-206ENST00000394611 PHOX2AO14813 284 aa8□□□□□ -1.13
RTN4-206ENST00000394611 SOX15O60248 233 aa8□□□□□ -1.13
RTN4-206ENST00000394611 MPZL1O95297 269 aa8□□□□□ -1.13
RTN4-206ENST00000394611 HLA-DQB1P01920 261 aa8□□□□□ -1.13
RTN4-206ENST00000394611 ALOX5APP20292 161 aa8□□□□□ -1.13
RTN4-206ENST00000394611 PRPH2P23942 346 aa8□□□□□ -1.13
RTN4-206ENST00000394611 MECP2P51608 486 aaKnown RBP8□□□□□ -1.13
RTN4-206ENST00000394611 AFF3P51826 1226 aaKnown RBP8□□□□□ -1.13
RTN4-206ENST00000394611 TAS2R19P59542 299 aa8□□□□□ -1.13
RTN4-206ENST00000394611 NHLRC3Q5JS37 347 aa8□□□□□ -1.13
RTN4-206ENST00000394611 AKR1C8PQ5T2L2 129 aa8□□□□□ -1.13
RTN4-206ENST00000394611 ZNF626Q68DY1 528 aa8□□□□□ -1.13
RTN4-206ENST00000394611 PWWP2BQ6NUJ5 590 aa8□□□□□ -1.13
RTN4-206ENST00000394611 TMEM184AQ6ZMB5 413 aa8□□□□□ -1.13
RTN4-206ENST00000394611 TRMT2BQ96GJ1 504 aaKnown RBP8□□□□□ -1.13
RTN4-206ENST00000394611 SGPP1Q9BX95 441 aa8□□□□□ -1.13
RTN4-206ENST00000394611 ANKRD19PQ9H560 264 aa8□□□□□ -1.13
RTN4-206ENST00000394611 RHOFQ9HBH0 211 aa8□□□□□ -1.13
RTN4-206ENST00000394611 MRPS2Q9Y399 296 aaKnown RBP8□□□□□ -1.13
RTN4-206ENST00000394611 ANAPC1Q9H1A4 1944 aa8□□□□□ -1.13
RTN4-206ENST00000394611 TMEM269A0A1B0GVZ9 245 aa8□□□□□ -1.13
RTN4-206ENST00000394611 MOSPD3O75425 235 aa8□□□□□ -1.13
RTN4-206ENST00000394611 EPPINO95925 133 aa8□□□□□ -1.13
RTN4-206ENST00000394611 NR2C1P13056 603 aa8□□□□□ -1.13
RTN4-206ENST00000394611 EPHA1P21709 976 aa8□□□□□ -1.13
RTN4-206ENST00000394611 CCNOP22674 350 aa8□□□□□ -1.13
RTN4-206ENST00000394611 HTR2CP28335 458 aa8□□□□□ -1.13
RTN4-206ENST00000394611 LIMS1P48059 325 aa8□□□□□ -1.13
RTN4-206ENST00000394611 EMP2P54851 167 aa8□□□□□ -1.13
RTN4-206ENST00000394611 SLC26A5P58743 744 aa8□□□□□ -1.13
RTN4-206ENST00000394611 ADIPOR2Q86V24 386 aa8□□□□□ -1.13
RTN4-206ENST00000394611 ZNRF4Q8WWF5 429 aa8□□□□□ -1.13
RTN4-206ENST00000394611 RSC1A1Q92681 617 aa8□□□□□ -1.13
RTN4-206ENST00000394611 OR11A1Q9GZK7 315 aa8□□□□□ -1.13
RTN4-206ENST00000394611 EHFQ9NZC4 300 aa8□□□□□ -1.13
RTN4-206ENST00000394611 SIGLEC7Q9Y286 467 aa8□□□□□ -1.13
RTN4-206ENST00000394611 PTPRZ1P23471 2315 aaPredicted RBP8□□□□□ -1.13
RTN4-206ENST00000394611 ZNF850A8MQ14 1090 aa8□□□□□ -1.13
RTN4-206ENST00000394611 RIDAP52758 137 aaKnown RBP8□□□□□ -1.13
RTN4-206ENST00000394611 SSX2Q16385 188 aa8□□□□□ -1.13
RTN4-206ENST00000394611 CHRFAM7AQ494W8 412 aa8□□□□□ -1.13
RTN4-206ENST00000394611 PHLDA2Q53GA4 152 aa8□□□□□ -1.13
RTN4-206ENST00000394611 ABHD12BQ7Z5M8 362 aaPredicted RBP8□□□□□ -1.13
RTN4-206ENST00000394611 OR10D4PQ8NGN7 298 aa8□□□□□ -1.13
RTN4-206ENST00000394611 DMRTA2Q96SC8 542 aa8□□□□□ -1.13
RTN4-206ENST00000394611 TMPRSS13Q9BYE2 586 aa8□□□□□ -1.13
RTN4-206ENST00000394611 PIGMQ9H3S5 423 aa8□□□□□ -1.13
RTN4-206ENST00000394611 SPTA1P02549 2419 aa8□□□□□ -1.13
RTN4-206ENST00000394611 OBSL1O75147 1896 aa8□□□□□ -1.13
RTN4-206ENST00000394611 TMEM218A2RU14 115 aa8□□□□□ -1.13
RTN4-206ENST00000394611 C4orf51C9J302 202 aa8□□□□□ -1.13
RTN4-206ENST00000394611 HRKO00198 91 aa8□□□□□ -1.13
RTN4-206ENST00000394611 PLPP2O43688 288 aa8□□□□□ -1.13
RTN4-206ENST00000394611 ICOSLGO75144 302 aa8□□□□□ -1.13
RTN4-206ENST00000394611 CEBPBP17676 345 aa8□□□□□ -1.13
RTN4-206ENST00000394611 PMPCAQ10713 525 aa8□□□□□ -1.13
RTN4-206ENST00000394611 ELAVL3Q14576 367 aaKnown RBP8□□□□□ -1.13
RTN4-206ENST00000394611 ELFN2Q5R3F8 820 aa8□□□□□ -1.13
RTN4-206ENST00000394611 BRICD5Q6PL45 260 aa8□□□□□ -1.13
RTN4-206ENST00000394611 FJX1Q86VR8 437 aa8□□□□□ -1.13
RTN4-206ENST00000394611 RNF141Q8WVD5 230 aa8□□□□□ -1.13
RTN4-206ENST00000394611 S1PR5Q9H228 398 aa8□□□□□ -1.13
RTN4-206ENST00000394611 TAS2R8Q9NYW2 309 aa8□□□□□ -1.13
RTN4-206ENST00000394611 B9D1Q9UPM9 204 aa8□□□□□ -1.13
RTN4-206ENST00000394611 DSPPQ9NZW4 1301 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 ABCA1O95477 2261 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 A0A0D9SG52 128 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 PLSCR5A0PG75 271 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 F5H5K5 113 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 CLDN4O14493 209 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 SRPX2O60687 465 aaPredicted RBP7.99□□□□□ -1.13
RTN4-206ENST00000394611 CYTIPO60759 359 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 CD63P08962 238 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 RAB40ALP0C0E4 278 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 HOXB9P17482 250 aaPredicted RBP7.99□□□□□ -1.13
RTN4-206ENST00000394611 GDI1P31150 447 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 CDKN3Q16667 212 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 IAH1Q2TAA2 248 aaPredicted RBP7.99□□□□□ -1.13
RTN4-206ENST00000394611 FIGLAQ6QHK4 219 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 PPP1R3BQ86XI6 285 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 DND1Q8IYX4 353 aaKnown RBP7.99□□□□□ -1.13
RTN4-206ENST00000394611 APCDD1LQ8NCL9 501 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 OR2A1Q8NGT9 310 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 OR4C3Q8NH37 302 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 OR4K15Q8NH41 348 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 RAB40AQ8WXH6 277 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 SLC25A38Q96DW6 304 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 OR52A5Q9H2C5 316 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 PRDM6Q9NQX0 595 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 STEAP1Q9UHE8 339 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 TIMM8BQ9Y5J9 83 aaPredicted RBP7.99□□□□□ -1.13
RTN4-206ENST00000394611 SLC22A7Q9Y694 548 aa7.99□□□□□ -1.13
RTN4-206ENST00000394611 PTP4A3O75365 173 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms