RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 TPK1Q9H3S4 243 aa16.2■□□□□ 0.18
TMEM88B-201ENST00000378821 SIAEQ9HAT2 523 aa16.2■□□□□ 0.18
TMEM88B-201ENST00000378821 VSX1Q9NZR4 365 aaPredicted RBP16.2■□□□□ 0.18
TMEM88B-201ENST00000378821 RNF212BA8MTL3 300 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 GNGT2O14610 69 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 ARPC3O15145 178 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 PHF1O43189 567 aaPredicted RBP16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 TGFAP01135 160 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 IL2RGP31785 369 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 CLEC12AQ5QGZ9 265 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 C1orf146Q5VVC0 180 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 UGT2A3Q6UWM9 527 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 RASSF6Q6ZTQ3 369 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 PHC2Q8IXK0 858 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 GIPC3Q8TF64 312 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 UTP4Q969X6 686 aaKnown RBP16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 NIPSNAP1Q9BPW8 284 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 YY1AP1Q9H869 796 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 RNF121Q9H920 327 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 CHODLQ9H9P2 273 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 FBN3Q75N90 2809 aa16.19■□□□□ 0.18
TMEM88B-201ENST00000378821 SVEP1Q4LDE5 3571 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 LYNX1G3V0Z9 82 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 TIPRLO75663 272 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 SOX14O95416 240 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 HPXP02790 462 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 SCG5P05408 212 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 LYNX1P0DP58 116 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 HIST1H1CP16403 213 aaKnown RBP16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 ALDH3B1P43353 468 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 UCP2P55851 309 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 CCNIQ14094 377 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 RGS7BPQ6MZT1 257 aaPredicted RBP16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 RPL13AP3Q6NVV1 102 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 HS3ST5Q8IZT8 346 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 CPEB3Q8NE35 698 aaKnown RBP16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 OR52L1Q8NGH7 329 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 OR1J2Q8NGS2 313 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 OR4K13Q8NH42 304 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 RDH5Q92781 318 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 FEVQ99581 238 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 POLE4Q9NR33 117 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 IL20Q9NYY1 176 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 DNAJB9Q9UBS3 223 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 STAB1Q9NY15 2570 aa16.18■□□□□ 0.18
TMEM88B-201ENST00000378821 ARRDC5A6NEK1 342 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 BHLHE40O14503 412 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 SLC16A7O60669 478 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 E2F6O75461 281 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 ZNF32P17041 273 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 SRD5A1P18405 259 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 GSTM3P21266 225 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 MSR1P21757 451 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 ACHEP22303 614 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 COL8A2P25067 703 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 LAP3P28838 519 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 RAD52P43351 418 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 CDH15P55291 814 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 TMEM33P57088 247 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 ENDOGQ14249 297 aaKnown RBP16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 MAD2L1BPQ15013 274 aaPredicted RBP16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 TRIP10Q15642 601 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 TBC1D28Q2M2D7 210 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 FAM27BQ5VT28 67 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 LEG1Q6P5S2 330 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 JAZF1Q86VZ6 243 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 LINC01356Q8N9X3 169 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 TSSK2Q96PF2 358 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 NMNAT3Q96T66 252 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 BCL2L14Q9BZR8 327 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 NUAK2Q9H093 628 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 RERGLQ9H628 205 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 CDH20Q9HBT6 801 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 EMC7Q9NPA0 242 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 TBC1D23Q9NUY8 699 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 NKIRAS2Q9NYR9 191 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 PDP1Q9P0J1 537 aaPredicted RBP16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 DUSP13Q9UII6 198 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 FZR1Q9UM11 496 aa16.17■□□□□ 0.18
TMEM88B-201ENST00000378821 IQCMA0A1B0GVH7 501 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 DCTN6O00399 190 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 EBAG9O00559 213 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 ICMTO60725 284 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 KHDRBS3O75525 346 aaKnown RBP16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 RP2O75695 350 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 CIB2O75838 187 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 NCR1O76036 304 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 CST2P09228 141 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 CCL2P13500 99 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 APEX1P27695 318 aaKnown RBP16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 NOS3P29474 1203 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 PLP2Q04941 152 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 DBPQ10586 325 aaPredicted RBP16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 PABPC1L2AQ5JQF8 200 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 SLC35F1Q5T1Q4 408 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 SDR9C7Q8NEX9 313 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 OR4Q3Q8NH05 313 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 SNX18Q96RF0 628 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 ZNF416Q9BWM5 594 aa16.16■□□□□ 0.18
TMEM88B-201ENST00000378821 KCNN2Q9H2S1 579 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms