RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 TAF9BQ9HBM6 251 aa15.82■□□□□ 0.12
PTPRU-202ENST00000373779 FGF21Q9NSA1 209 aa15.82■□□□□ 0.12
PTPRU-202ENST00000373779 NTN1O95631 604 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 APOBEC1P41238 236 aaKnown RBP15.81■□□□□ 0.12
PTPRU-202ENST00000373779 SNRPNP63162 240 aaKnown RBP15.81■□□□□ 0.12
PTPRU-202ENST00000373779 OR10K2Q6IF99 312 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 UBE3DQ7Z6J8 389 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 TRMT61AQ96FX7 289 aaKnown RBP15.81■□□□□ 0.12
PTPRU-202ENST00000373779 TXNIPQ9H3M7 391 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 SMCO4Q9NRQ5 59 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 MYO16Q9Y6X6 1858 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 NR0B2Q15466 257 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 ZNF74Q16587 644 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 PRTGQ2VWP7 1150 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 FAM74A1Q5RGS3 127 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 CORO6Q6QEF8 472 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 OR52N5Q8NH56 324 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 DNAJB12Q9NXW2 375 aaKnown RBP15.81■□□□□ 0.12
PTPRU-202ENST00000373779 RPS10-NUDT3A0A1W2PQS6 291 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 SLC17A2O00624 439 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 SCRG1O75711 98 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 ZFPL1O95159 310 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 RPS10P46783 165 aaKnown RBP15.81■□□□□ 0.12
PTPRU-202ENST00000373779 GRB2P62993 217 aaKnown RBP15.81■□□□□ 0.12
PTPRU-202ENST00000373779 NUDCD2Q8WVJ2 157 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 EMC6Q9BV81 110 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 OR11A1Q9GZK7 315 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 CHST11Q9NPF2 352 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 TMEM240Q5SV17 173 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 PRAMEF20Q5VT98 475 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 DMKNQ6E0U4 476 aaPredicted RBP15.81■□□□□ 0.12
PTPRU-202ENST00000373779 KCNRGQ8N5I3 272 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 FBXO34Q9NWN3 711 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 CD300LBA8K4G0 201 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 TK1P04183 234 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 RAC2P15153 192 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 RAB5CP51148 216 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 SLC25A1P53007 311 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 PCBD1P61457 104 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 ZNF85Q03923 595 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 C9orf62Q8N4C0 152 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 TMEM229BQ8NBD8 167 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 FAM213BQ8TBF2 198 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 OR51E1Q8TCB6 317 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 SERGEFQ9UGK8 458 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 MYO9BQ13459 2157 aa15.81■□□□□ 0.12
PTPRU-202ENST00000373779 A6NLC8 198 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 GCM2O75603 506 aaPredicted RBP15.8■□□□□ 0.12
PTPRU-202ENST00000373779 FOLR3P41439 243 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 HTR5AP47898 357 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 UBE2IP63279 158 aaKnown RBP15.8■□□□□ 0.12
PTPRU-202ENST00000373779 LYG2Q86SG7 212 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 SPICQ8N5J4 248 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 TEX19Q8NA77 164 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 A0A1B0GX78 115 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 LSM11P83369 360 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTPRU-202ENST00000373779 PPP1R3BQ86XI6 285 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 TMED6Q8WW62 240 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 MRPS18AQ9NVS2 196 aaKnown RBP15.8■□□□□ 0.12
PTPRU-202ENST00000373779 OR5V1Q9UGF6 321 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 ACAD8Q9UKU7 415 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 B9D1Q9UPM9 204 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 B3GALT5Q9Y2C3 310 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 PUS1Q9Y606 427 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTPRU-202ENST00000373779 H0YIG0 161 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 DOK3Q7L591 496 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 PRR18Q8N4B5 295 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 PIGTQ969N2 578 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 ARID1BQ8NFD5 2236 aaPredicted RBP15.8■□□□□ 0.12
PTPRU-202ENST00000373779 BHLHE40O14503 412 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 CTSVO60911 334 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 OR7C1O76099 320 aaPredicted RBP15.8■□□□□ 0.12
PTPRU-202ENST00000373779 ALOX5APP20292 161 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 KCNAB1Q14722 419 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 CDONQ4KMG0 1287 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 TMEM196Q5HYL7 178 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 ZNF770Q6IQ21 691 aaPredicted RBP15.8■□□□□ 0.12
PTPRU-202ENST00000373779 OR4D6Q8NGJ1 314 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 TSLPQ969D9 159 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 GPA33Q99795 319 aa15.8■□□□□ 0.12
PTPRU-202ENST00000373779 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 TNFSF12O43508 249 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 BCL2L11O43521 198 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 PRICKLE4Q2TBC4 344 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 OR5T1Q8NG75 326 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 OR6C68A6NDL8 312 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 RFPL4AA6NLU0 287 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 RFPL4AL1F8VTS6 287 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 HYAL3O43820 417 aaPredicted RBP15.79■□□□□ 0.12
PTPRU-202ENST00000373779 ITGB2P05107 769 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 CD79AP11912 226 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 HRH1P35367 487 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 ZNF133P52736 654 aaPredicted RBP15.79■□□□□ 0.12
PTPRU-202ENST00000373779 RPS18P62269 152 aaKnown RBP15.79■□□□□ 0.12
PTPRU-202ENST00000373779 HAS2Q92819 552 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 CCDC163A0A0D9SF12 145 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 PRAMEF25A6NGN4 478 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 LEUTXA8MZ59 168 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 ARPC3O15145 178 aa15.79■□□□□ 0.12
PTPRU-202ENST00000373779 GNB3P16520 340 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms