RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 EURLQ9NYK6 297 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 GSTK1Q9Y2Q3 226 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR10H1Q9Y4A9 318 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 HYOU1Q9Y4L1 999 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 SPACA6W5XKT8 324 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 PKDREJQ9NTG1 2253 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 DIDO1Q9BTC0 2240 aaKnown RBP4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 SPTBP11277 2137 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 PCNX3Q9H6A9 2034 aa4.31□□□□□ -1.72
RNU4-39P-201ENST00000362455 A0A0J9YY10 115 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 A0A1B0GX78 115 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 SLC5A10A0PJK1 596 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 C2orf74A8MZ97 194 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 G3V3Y1 287 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 K7EQM0 130 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 BCAS1O75363 584 aaPredicted RBP4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 RHBDL1O75783 438 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 IGF1P05019 195 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 HBQ1P09105 142 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 CT45A10P0DMU9 189 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 LAMP1P11279 417 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 ATP1B2P14415 290 aaPredicted RBP4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 CPN1P15169 458 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 BCL3P20749 454 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 MAGP20916 626 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 NT5EP21589 574 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 CHI3L1P36222 383 aaPredicted RBP4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 CDKN2BP42772 138 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 BDKRB1P46663 353 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 CD151P48509 253 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF140P52738 457 aaPredicted RBP4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 RGS1Q08116 209 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 PUDPQ08623 228 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 SELPLGQ14242 412 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 TAF1AQ15573 450 aaPredicted RBP4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 CYP51A1Q16850 503 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 TATDN3Q17R31 274 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 SLC22A6Q4U2R8 563 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 MEDAGQ5VYS4 303 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF57Q68EA5 555 aaPredicted RBP4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 PYHIN1Q6K0P9 492 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 SERPINA9Q86WD7 417 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 IFNEQ86WN2 208 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 PRSS58Q8IYP2 241 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 C2orf73Q8N5S3 287 aaPredicted RBP4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF607Q96SK3 696 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 SLC7A5P2Q9GIP4 190 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF160Q9HCG1 818 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 CUTCQ9NTM9 273 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 SENP1Q9P0U3 644 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 SLC2A6Q9UGQ3 507 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 TBK1Q9UHD2 729 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 CRLS1Q9UJA2 301 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF835Q9Y2P0 537 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 HEBP2Q9Y5Z4 205 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 CNTRLQ7Z7A1 2325 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 STAB1Q9NY15 2570 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 VPS13CQ709C8 3753 aa4.3□□□□□ -1.72
RNU4-39P-201ENST00000362455 IGLV3-12A0A075B6K2 115 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 A0A1W2PQ72 361 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 MAGEB3O15480 346 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 KLHL41O60662 606 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 SLC19A2O60779 497 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 TRIM3O75382 744 aaPredicted RBP4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 SLC2A10O95528 541 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 GYPCP04921 128 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 COX6A1P12074 109 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 COX6B1P14854 86 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 UQCRC2P22695 453 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 MARCKSL1P49006 195 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 RPL8P62917 257 aaKnown RBP4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 EWSR1Q01844 656 aaKnown RBP eCLIP4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 BDH1Q02338 343 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 TLE4Q04727 773 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 MESDQ14696 234 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 SLC5A12Q1EHB4 618 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 CFAP157Q5JU67 520 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 DCST2Q5T1A1 773 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 FRMPD2BQ6IN97 320 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 Q6ZPB1 254 aaPredicted RBP4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 PID1Q7Z2X4 250 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 KIAA1328Q86T90 577 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR52M1Q8NGK5 317 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 FBXO30Q8TB52 745 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 VN1R17PQ8TDU5 208 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 ADAMTS16Q8TE57 1224 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 TFB1MQ8WVM0 346 aaKnown RBP4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 NRGNQ92686 78 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 HAUS1Q96CS2 278 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 DNAJC1Q96KC8 554 aaKnown RBP4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 IMMP1LQ96LU5 166 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 COPS8Q99627 209 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 NPAS2Q99743 824 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 HES7Q9BYE0 225 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 OPN3Q9H1Y3 402 aaPredicted RBP4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 GOLPH3Q9H4A6 298 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 WDR54Q9H977 334 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 MCCC2Q9HCC0 563 aa4.29□□□□□ -1.72
RNU4-39P-201ENST00000362455 EHFQ9NZC4 300 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms