RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 IGF2P01344 180 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 IGHG1P01857 330 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 FUT1P19526 365 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 LOXL3P58215 753 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 PROK1P58294 105 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 TAS2R41P59536 307 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 PLP2Q04941 152 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 TMEM155Q4W5P6 130 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 LRFN4Q6PJG9 635 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 HDDC2Q7Z4H3 204 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 DPPA2Q7Z7J5 298 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 IPCEF1Q8WWN9 437 aaPredicted RBP13.28□□□□□ -0.28
DDX55-202ENST00000354291 RASSF4Q9H2L5 321 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 C1orf198Q9H425 327 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 RIMS3Q9UJD0 308 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 KLHL21Q9UJP4 597 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 C5orf63A6NC05 138 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 CENPBD1B2RD01 187 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 MGRN1O60291 552 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 PIP5K1CO60331 668 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 QDPRP09417 244 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 PGA4P0DJD7 388 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 PGA3P0DJD8 388 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 THRBP10828 461 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 APLNRP35414 380 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 CLRN1P58418 232 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 BTG1P62324 171 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 TNFAIP6P98066 277 aaPredicted RBP13.27□□□□□ -0.29
DDX55-202ENST00000354291 MELKQ14680 651 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 ZMYND11Q15326 602 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 TMEM255AQ5JRV8 349 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 KPRPQ5T749 579 aaPredicted RBP13.27□□□□□ -0.29
DDX55-202ENST00000354291 SLC16A14Q7RTX9 510 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 NKAIN4Q8IVV8 208 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 POU5F2Q8N7G0 328 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 OR4K5Q8NGD3 323 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 TMEM239Q8WW34 195 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 LIPHQ8WWY8 451 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 MSL2Q9HCI7 577 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 CYSLTR2Q9NS75 346 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 TMEM38BQ9NVV0 291 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 ZDHHC8Q9ULC8 765 aa13.27□□□□□ -0.29
DDX55-202ENST00000354291 MCIDASD6RGH6 385 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 F5H0A9 414 aaPredicted RBP13.26□□□□□ -0.29
DDX55-202ENST00000354291 SLC22A2O15244 555 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 OR7A10O76100 309 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 MELTFP08582 738 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 TNFRSF1BP20333 461 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 IFNA8P32881 189 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 KDELR2P33947 212 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 OR1E2P47887 323 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 DAP3P51398 398 aaKnown RBP13.26□□□□□ -0.29
DDX55-202ENST00000354291 ZNF84P51523 738 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 RPL18Q07020 188 aaKnown RBP13.26□□□□□ -0.29
DDX55-202ENST00000354291 SF3A3Q12874 501 aaKnown RBP eCLIP13.26□□□□□ -0.297e-10■□□□□ 10.1
DDX55-202ENST00000354291 PIN1Q13526 163 aaPredicted RBP13.26□□□□□ -0.29
DDX55-202ENST00000354291 HIST3H3Q16695 136 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 SLC36A2Q495M3 483 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 NRN1LQ496H8 165 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 SAMD5Q5TGI4 173 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 C1orf174Q8IYL3 243 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 TMEM86BQ8N661 226 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 RBM15BQ8NDT2 890 aaKnown RBP13.26□□□□□ -0.29
DDX55-202ENST00000354291 OR2T12Q8NG77 320 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 TMEM255BQ8WV15 326 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 RAB40AQ8WXH6 277 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 SGTBQ96EQ0 304 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 FAM71F1Q96KD3 344 aaPredicted RBP13.26□□□□□ -0.29
DDX55-202ENST00000354291 SSBP3Q9BWW4 388 aaPredicted RBP13.26□□□□□ -0.29
DDX55-202ENST00000354291 MRPL13Q9BYD1 178 aaKnown RBP13.26□□□□□ -0.29
DDX55-202ENST00000354291 INIPQ9NRY2 104 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 STX18Q9P2W9 335 aaKnown RBP13.26□□□□□ -0.29
DDX55-202ENST00000354291 EIF3KQ9UBQ5 218 aaKnown RBP13.26□□□□□ -0.29
DDX55-202ENST00000354291 AP3M1Q9Y2T2 418 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 MED31Q9Y3C7 131 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 CAPN7Q9Y6W3 813 aa13.26□□□□□ -0.29
DDX55-202ENST00000354291 DOCK11Q5JSL3 2073 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 IGHV2-70DA0A0C4DH43 119 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 HTR3EA5X5Y0 456 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 FAM220BPB1ANY3 271 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 F13BP05160 661 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 WNT2P09544 360 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 LIPAP38571 399 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 UGT2B15P54855 530 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 SELENOWP63302 87 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 PAX2Q02962 417 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 HSF2Q03933 536 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 CYBRD1Q53TN4 286 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 GPR157Q5UAW9 335 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 RUSC1-AS1Q66K80 236 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 CGB2Q6NT52 195 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 PFN4Q8NHR9 129 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 SLC25A40Q8TBP6 338 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 KLF14Q8TD94 323 aaPredicted RBP13.25□□□□□ -0.29
DDX55-202ENST00000354291 LZICQ8WZA0 190 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 DYRK2Q92630 601 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 MCHR2Q969V1 340 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 MARS2Q96GW9 593 aaKnown RBP13.25□□□□□ -0.29
DDX55-202ENST00000354291 OR2J1Q9GZK6 312 aa13.25□□□□□ -0.29
DDX55-202ENST00000354291 LRCH1Q9Y2L9 728 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms