RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MRPL49Q13405 166 aaKnown RBP14.67□□□□□ -0.06
NPHP3-201ENST00000337331 SLC9A3R2Q15599 337 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 TRMT12Q53H54 448 aaKnown RBP14.67□□□□□ -0.06
NPHP3-201ENST00000337331 OR51D1Q8NGF3 324 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 HDAC8Q9BY41 377 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 MCOLN1Q9GZU1 580 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 BCO1Q9HAY6 547 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 THAP10Q9P2Z0 257 aaPredicted RBP14.67□□□□□ -0.06
NPHP3-201ENST00000337331 CCDC88CQ9P219 2028 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 FER1L6Q2WGJ9 1857 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 HOXB5P09067 269 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 CD38P28907 300 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 EID2Q8N6I1 236 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 SPTSSAQ969W0 71 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 Q96M85 177 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 CD3DP04234 171 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 SRYQ05066 204 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 MEF2DQ14814 521 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 TMEM52BQ4KMG9 183 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 TMEM201Q5SNT2 666 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 GPR157Q5UAW9 335 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 TEX19Q8NA77 164 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 MS4A6EQ96DS6 147 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 SRPK3Q9UPE1 567 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 DMRT1Q9Y5R6 373 aa14.67□□□□□ -0.06
NPHP3-201ENST00000337331 PRRT4C9JH25 899 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 FCMRO60667 390 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 P2RX1P51575 399 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 ZP1P60852 638 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 Q499Y3 187 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 OR2T2Q6IF00 324 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 C11orf87Q6NUJ2 197 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 PLPP6Q8IY26 295 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 DTD1Q8TEA8 209 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 STRADBQ9C0K7 418 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 OR10A5Q9H207 317 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 SAGE1Q9NXZ1 904 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 MED16Q9Y2X0 877 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 HMGB3O15347 200 aaKnown RBP14.66□□□□□ -0.06
NPHP3-201ENST00000337331 TGOLN2O43493 480 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 RPA2P15927 270 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 YPEL5P62699 121 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 TGIF2LXQ8IUE1 241 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 SLC30A7Q8NEW0 376 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 PHOSPHO2Q8TCD6 241 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 ARSGQ96EG1 525 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 CUTCQ9NTM9 273 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 ARFGEF1Q9Y6D6 1849 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 LAMB2P55268 1798 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 NUDT19A8MXV4 375 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 H3BNC9 293 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 NUDT21O43809 227 aaKnown RBP14.66□□□□□ -0.06
NPHP3-201ENST00000337331 CNOT4O95628 575 aaKnown RBP14.66□□□□□ -0.06
NPHP3-201ENST00000337331 CD14P08571 375 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 RPS15P62841 145 aaKnown RBP14.66□□□□□ -0.06
NPHP3-201ENST00000337331 Q6ZRG5 221 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 ADIPOR2Q86V24 386 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 TEAD3Q99594 435 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 TREM2Q9NZC2 230 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 TINAGQ9UJW2 476 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 CDK5RAP2Q96SN8 1893 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 NME2P1O60361 137 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 FASLGP48023 281 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 TAS2R31P59538 309 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 SIRT6Q8N6T7 355 aa14.66□□□□□ -0.06
NPHP3-201ENST00000337331 CCDC86Q9H6F5 360 aaKnown RBP14.66□□□□□ -0.06
NPHP3-201ENST00000337331 LY75O60449 1722 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 CBY3A6NI87 242 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 K7EPK0 472 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 SOX15O60248 233 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 DOK2O60496 412 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 FBP1P09467 338 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 HMGA2P52926 109 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 FAM71E2Q8N5Q1 922 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 C19orf47Q8N9M1 422 aaKnown RBP14.65□□□□□ -0.06
NPHP3-201ENST00000337331 GGACTQ9BVM4 153 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 REG4Q9BYZ8 158 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 SELENOIQ9C0D9 397 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 ING1Q9UK53 422 aaPredicted RBP14.65□□□□□ -0.06
NPHP3-201ENST00000337331 NTNG1Q9Y2I2 539 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 ABOP16442 354 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 CSNK1A1P48729 337 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 F2RL1P55085 397 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 MED25Q71SY5 747 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 BSCL2Q96G97 398 aaPredicted RBP14.65□□□□□ -0.06
NPHP3-201ENST00000337331 THOC3Q96J01 351 aaKnown RBP14.65□□□□□ -0.06
NPHP3-201ENST00000337331 FAM230AA0A1W2PPH8 454 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 SLC31A2O15432 143 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 SLC35E2P0CK97 266 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 RAB5AP20339 215 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 OR11G2Q8NGC1 345 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 FNDC9Q8TBE3 224 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 OR1E3Q8WZA6 343 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 KIRREL1Q96J84 757 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 ELF4Q99607 663 aaPredicted RBP14.65□□□□□ -0.06
NPHP3-201ENST00000337331 SGPP1Q9BX95 441 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 TAF9BQ9HBM6 251 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 NCDNQ9UBB6 729 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 CCL27Q9Y4X3 112 aa14.65□□□□□ -0.06
NPHP3-201ENST00000337331 TSFMP43897 325 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms