RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 IGHV1-46P01743 117 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 CTLA4P16410 223 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 LCN6P62502 163 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 KRR1Q13601 381 aaKnown RBP15.09■□□□□ 0.01
HDDC3-201ENST00000330334 KRT72Q14CN4 511 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 KRTAP24-1Q3LI83 254 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 ZMAT1Q5H9K5 638 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 TMEM255AQ5JRV8 349 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 FGD3Q5JSP0 725 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 SPATA46Q5T0L3 261 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 LIPNQ5VXI9 398 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 RFPL4BQ6ZWI9 263 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 USP51Q70EK9 711 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 GLB1L2Q8IW92 636 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 OR51F2Q8NH61 342 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 PYURFQ96I23 114 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 HIF1ANQ9NWT6 349 aa15.09■□□□□ 0.01
HDDC3-201ENST00000330334 TRAV20A0A0B4J274 112 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 TRBV4-1A0A0J9YWV2 114 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 CLDN25C9JDP6 229 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 KHDRBS3O75525 346 aaKnown RBP15.08■□□□□ 0
HDDC3-201ENST00000330334 SEMG1P04279 462 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 CD55P08174 381 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 SRP14P37108 136 aaKnown RBP15.08■□□□□ 0
HDDC3-201ENST00000330334 FXYD6P3P58550 94 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 AQP6Q13520 282 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 SEC23BQ15437 767 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 KCNMB1Q16558 191 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 TSTQ16762 297 aaKnown RBP15.08■□□□□ 0
HDDC3-201ENST00000330334 SPATS1Q496A3 300 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 ACSM5Q6NUN0 579 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 THSD4Q6ZMP0 1018 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 CPLX4Q7Z7G2 160 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 FAM86B1Q8N7N1 296 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 NPEPL1Q8NDH3 523 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 GTF3AQ92664 365 aaKnown RBP15.08■□□□□ 0
HDDC3-201ENST00000330334 TIMD4Q96H15 378 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 RSRC1Q96IZ7 334 aaKnown RBP15.08■□□□□ 0
HDDC3-201ENST00000330334 COG8Q96MW5 612 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 EGLN1Q9GZT9 426 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 SYT4Q9H2B2 425 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 NARFLQ9H6Q4 476 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 EMC7Q9NPA0 242 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 CD300AQ9UGN4 299 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 ATPIF1Q9UII2 106 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 MAGEL2Q9UJ55 1249 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 AURKCQ9UQB9 309 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 GRIP1Q9Y3R0 1128 aa15.08■□□□□ 0
HDDC3-201ENST00000330334 UNC119BA6NIH7 251 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 J3QW42 95 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 IMPA2O14732 288 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 TPD52L2O43399 206 aaKnown RBP15.07■□□□□ 0
HDDC3-201ENST00000330334 SGCEO43556 437 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 SPRY3O43610 288 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 SLC16A7O60669 478 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 UBOX5O94941 541 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 ABHD16AO95870 558 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 GSTM3P21266 225 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 RPS6KA3P51812 740 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 GLO1Q04760 184 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 SLC3A1Q07837 685 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 PSG7Q13046 419 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 MTX3Q5HYI7 312 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 SAMD4BQ5PRF9 694 aaKnown RBP15.07■□□□□ 0
HDDC3-201ENST00000330334 SMARCD3Q6STE5 483 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 VASH1Q7L8A9 365 aaPredicted RBP15.07■□□□□ 0
HDDC3-201ENST00000330334 PGAM4Q8N0Y7 254 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 TEX29Q8N6K0 151 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 RAB1CQ92928 201 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 RASD2Q96D21 266 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 RAB39BQ96DA2 213 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 ZNF665Q9H7R5 613 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 WIPI2Q9Y4P8 454 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 IER3IP1Q9Y5U9 82 aa15.07■□□□□ 0
HDDC3-201ENST00000330334 OR6C6A6NF89 314 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 ZSCAN5BA6NJL1 495 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 DOK2O60496 412 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 DEAF1O75398 565 aaPredicted RBP15.06■□□□□ 0
HDDC3-201ENST00000330334 CRABP1P29762 137 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 MVKQ03426 396 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 CDK5R2Q13319 367 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 PGM2L1Q6PCE3 622 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 RNF148Q8N7C7 305 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 OR52J3Q8NH60 311 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 LRRC37BQ96QE4 947 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 DCLRE1CQ96SD1 692 aaKnown RBP15.06■□□□□ 0
HDDC3-201ENST00000330334 GPA33Q99795 319 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 REPIN1Q9BWE0 567 aaKnown RBP15.06■□□□□ 0
HDDC3-201ENST00000330334 FAM107BQ9H098 131 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 PLEK2Q9NYT0 353 aa15.06■□□□□ 0
HDDC3-201ENST00000330334 COA3Q9Y2R0 106 aaPredicted RBP15.06■□□□□ 0
HDDC3-201ENST00000330334 A0A0A6YYJ9 748 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 ARPC3O15145 178 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 TCF21O43680 179 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 DIRAS1O95057 198 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 KITLGP21583 273 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 CDKN2AP42771 156 aaKnown RBP15.05■□□□□ -0
HDDC3-201ENST00000330334 HTR5AP47898 357 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 SCGB2A2Q13296 93 aa15.05■□□□□ -0
HDDC3-201ENST00000330334 RFX4Q33E94 735 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms