RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 SHARPINQ9H0F6 387 aa12.02□□□□□ -0.49
TNFRSF21-201ENST00000296861 PLEKHA1Q9HB21 404 aa12.02□□□□□ -0.49
TNFRSF21-201ENST00000296861 LYRM4Q9HD34 91 aa12.02□□□□□ -0.49
TNFRSF21-201ENST00000296861 TMED7Q9Y3B3 224 aa12.02□□□□□ -0.49
TNFRSF21-201ENST00000296861 FAM96BQ9Y3D0 163 aa12.02□□□□□ -0.49
TNFRSF21-201ENST00000296861 A0A087WV62 115 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 LOC100289279A0A1B0GTE1 492 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 TMEM212A6NML5 194 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 BET1O15155 118 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 PLRG1O43660 514 aaKnown RBP12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 CALCBP10092 127 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 RAB3AP20336 220 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 TAS2R19P59542 299 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 PMPCAQ10713 525 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 TMEM17Q86X19 198 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 ZNF701Q9NV72 531 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 ANKRD10Q9NXR5 420 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 HAO2Q9NYQ3 351 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 EMC3Q9P0I2 261 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 KLF15Q9UIH9 416 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 DOCK8Q8NF50 2099 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 G3V3Q6 166 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 WNT11O96014 354 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 HLA-DOBP13765 273 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 NKAPLQ5M9Q1 402 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 ZNF585AQ6P3V2 769 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 TMEM71Q6P5X7 295 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 CMIPQ8IY22 773 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 PRSS35Q8N3Z0 413 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 C19orf47Q8N9M1 422 aaKnown RBP12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 ADAMTS18Q8TE60 1221 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 ROBO4Q8WZ75 1007 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 LDAHQ9H6V9 325 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 NPDC1Q9NQX5 325 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 ATPIF1Q9UII2 106 aa12.01□□□□□ -0.49
TNFRSF21-201ENST00000296861 K7EQS6 105 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 KCNJ13O60928 360 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 ERCC1P07992 297 aaPredicted RBP12□□□□□ -0.49
TNFRSF21-201ENST00000296861 GAAP10253 952 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 HRH1P35367 487 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 RBM34P42696 430 aaKnown RBP12□□□□□ -0.49
TNFRSF21-201ENST00000296861 FHL5Q5TD97 284 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 LINC01590Q5TEZ4 76 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 OR52H1Q8NGJ2 320 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 NT5CQ8TCD5 201 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 VSTM2LQ96N03 204 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 PELOQ9BRX2 385 aaKnown RBP12□□□□□ -0.49
TNFRSF21-201ENST00000296861 GPN3Q9UHW5 284 aaPredicted RBP12□□□□□ -0.49
TNFRSF21-201ENST00000296861 SERTAD3Q9UJW9 196 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 SLCO1B1Q9Y6L6 691 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 COL6A3P12111 3177 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 LOC107986453A0A1B0GWG9 222 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 EFCAB7A8K855 629 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 ZNF878C9JN71 531 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 ZNF208O43345 1280 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 GSTZ1O43708 216 aaPredicted RBP12□□□□□ -0.49
TNFRSF21-201ENST00000296861 UPK3AO75631 287 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 SFTPDP35247 375 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 MRPS10P82664 201 aaKnown RBP12□□□□□ -0.49
TNFRSF21-201ENST00000296861 RASGEF1BQ0VAM2 473 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 MGAT2Q10469 447 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 SPICQ8N5J4 248 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 MARCH1Q8TCQ1 289 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 ELP5Q8TE02 316 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 C4orf45Q96LM5 186 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 ABHD6Q9BV23 337 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 PCDHB10Q9UN67 800 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 AUP1Q9Y679 476 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 SERPINA5P05154 406 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 ZNF20P17024 532 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 ALOX5APP20292 161 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 PPP1R1AQ13522 171 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 RSPO4Q2I0M5 234 aaPredicted RBP12□□□□□ -0.49
TNFRSF21-201ENST00000296861 PAPD4Q6PIY7 484 aaKnown RBP12□□□□□ -0.49
TNFRSF21-201ENST00000296861 TMEM92Q6UXU6 159 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 MAMDC2Q7Z304 686 aaPredicted RBP12□□□□□ -0.49
TNFRSF21-201ENST00000296861 NUP54Q7Z3B4 507 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 FJX1Q86VR8 437 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 CCDC36Q8IYA8 594 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 CLRN3Q8NCR9 226 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 PMM1Q92871 262 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 C20orf24Q9BUV8 137 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 REG4Q9BYZ8 158 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 NKX6-2Q9C056 277 aaPredicted RBP12□□□□□ -0.49
TNFRSF21-201ENST00000296861 GDE1Q9NZC3 331 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 PRODH2Q9UF12 536 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 YBX2Q9Y2T7 364 aaKnown RBP12□□□□□ -0.49
TNFRSF21-201ENST00000296861 LRRK1Q38SD2 2015 aa12□□□□□ -0.49
TNFRSF21-201ENST00000296861 SYT7O43581 403 aa11.99□□□□□ -0.49
TNFRSF21-201ENST00000296861 STK17BO94768 372 aa11.99□□□□□ -0.49
TNFRSF21-201ENST00000296861 WISP1O95388 367 aa11.99□□□□□ -0.49
TNFRSF21-201ENST00000296861 PNMTP11086 282 aa11.99□□□□□ -0.49
TNFRSF21-201ENST00000296861 NME2P22392 152 aa11.99□□□□□ -0.49
TNFRSF21-201ENST00000296861 HSD11B1P28845 292 aa11.99□□□□□ -0.49
TNFRSF21-201ENST00000296861 KIR3DL2P43630 455 aa11.99□□□□□ -0.49
TNFRSF21-201ENST00000296861 PDSS1Q5T2R2 415 aa11.99□□□□□ -0.49
TNFRSF21-201ENST00000296861 CLEC9AQ6UXN8 241 aa11.99□□□□□ -0.49
TNFRSF21-201ENST00000296861 RTN4RL2Q86UN3 420 aa11.99□□□□□ -0.49
TNFRSF21-201ENST00000296861 C15orf40Q8WUR7 153 aa11.99□□□□□ -0.49
TNFRSF21-201ENST00000296861 PNPLA2Q96AD5 504 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms