RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 TMEM14AQ9Y6G1 99 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 PRUNE2Q8WUY3 3088 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 A0A0D9SG52 128 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 C13orf42A0A1B0GVH6 325 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 TMEM127O75204 238 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 GP1BAP07359 652 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 CA3P07451 260 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 AKR1C4P17516 323 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 PPIAP62937 165 aaKnown RBP16.16■□□□□ 0.18
TRAF4-201ENST00000262395 EIF2B1Q14232 305 aaKnown RBP16.16■□□□□ 0.18
TRAF4-201ENST00000262395 ARMC6Q6NXE6 501 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 ZNF615Q8N8J6 731 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 CHST4Q8NCG5 386 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 CYYR1Q96J86 154 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 TMEM231Q9H6L2 316 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 FANCFQ9NPI8 374 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 UBQLN4Q9NRR5 601 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 YBX2Q9Y2T7 364 aaKnown RBP16.16■□□□□ 0.18
TRAF4-201ENST00000262395 EMC9Q9Y3B6 208 aa16.16■□□□□ 0.18
TRAF4-201ENST00000262395 C17orf105B2RV13 164 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 CLDN4O14493 209 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 WDPCPO95876 746 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 CTLA4P16410 223 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 AGTR1P30556 359 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 ACKR1Q16570 336 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 TMEM17Q86X19 198 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 ZSCAN1Q8NBB4 408 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 OR2AT4A6NND4 320 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 SOX1O00570 391 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-201ENST00000262395 BCL2L11O43521 198 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 FADS1O60427 444 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 HNRNPA2B1P22626 353 aaKnown RBP16.15■□□□□ 0.18
TRAF4-201ENST00000262395 SRSF3P84103 164 aaKnown RBP16.15■□□□□ 0.18
TRAF4-201ENST00000262395 ZNF679Q8IYX0 411 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 TMEM229BQ8NBD8 167 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 NUDCD2Q8WVJ2 157 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 ALX4Q9H161 411 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-201ENST00000262395 ZNF768Q9H5H4 540 aaKnown RBP16.15■□□□□ 0.18
TRAF4-201ENST00000262395 CKLFQ9UBR5 152 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 MRPS33Q9Y291 106 aaKnown RBP16.15■□□□□ 0.18
TRAF4-201ENST00000262395 A0A1W2PPC1 479 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 B4DGG1 531 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 EIF1AYO14602 144 aaKnown RBP16.15■□□□□ 0.18
TRAF4-201ENST00000262395 CXCR1P25024 350 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 DNASE1L1P49184 302 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 SNTB1Q13884 538 aaKnown RBP16.15■□□□□ 0.18
TRAF4-201ENST00000262395 RAB12Q6IQ22 244 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 FAM166AQ6J272 317 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 ZNF584Q8IVC4 421 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 LINC00346Q8IVM7 164 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 OR13C3Q8NGS6 347 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 PAQR8Q8TEZ7 354 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 MBD2Q9UBB5 411 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 LRP12Q9Y561 859 aa16.15■□□□□ 0.18
TRAF4-201ENST00000262395 ICOSLGO75144 302 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 TXNDC12O95881 172 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 INSM1Q01101 510 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-201ENST00000262395 HHEXQ03014 270 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 PAPD4Q6PIY7 484 aaKnown RBP16.14■□□□□ 0.17
TRAF4-201ENST00000262395 PUSL1Q8N0Z8 303 aaKnown RBP16.14■□□□□ 0.17
TRAF4-201ENST00000262395 ADAD2Q8NCV1 583 aaKnown RBP16.14■□□□□ 0.17
TRAF4-201ENST00000262395 OR4D6Q8NGJ1 314 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 SLC25A21Q9BQT8 299 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-201ENST00000262395 ABHD6Q9BV23 337 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 SEMA6CQ9H3T2 930 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 A0A1B0GW55 424 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 OR5K4A6NMS3 321 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 DUX4L2P0CJ85 424 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 DUX4L3P0CJ86 424 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 DUX4L4P0CJ87 422 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 DUX4L5P0CJ88 424 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 DUX4L6P0CJ89 424 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 DUX4L7P0CJ90 424 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 ZNF117Q03924 483 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 MANEAQ5SRI9 462 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 FNDC7Q5VTL7 733 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 SLC22A18ASQ8N1D0 253 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 PRR13Q9NZ81 148 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 DUX4Q9UBX2 424 aa16.14■□□□□ 0.17
TRAF4-201ENST00000262395 A0A1B0GTI1 187 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 WIPF3A6NGB9 483 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 CD8AP01732 235 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 CLPSP04118 112 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 CASRP41180 1078 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 SCAND1P57086 179 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 IL13RA1P78552 427 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 RIPPLY1Q0D2K3 151 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 FUT7Q11130 342 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 SLC18B1Q6NT16 456 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 TMPPEQ6ZT21 453 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 LINC00469Q8N7U9 141 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 C19orf47Q8N9M1 422 aaKnown RBP16.13■□□□□ 0.17
TRAF4-201ENST00000262395 RNF128Q8TEB7 428 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 MAP3K3Q99759 626 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 OR11A1Q9GZK7 315 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 RP1P56715 2156 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 CPED1A4D0V7 1026 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 CD2P06729 351 aa16.13■□□□□ 0.17
TRAF4-201ENST00000262395 FLI1Q01543 452 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-201ENST00000262395 SERTAD2Q14140 314 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms