RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 C10orf111Q8N326 155 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 ZNF786Q8N393 782 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 FAM86B1Q8N7N1 296 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 SMYD1Q8NB12 490 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 OR7G1Q8NGA0 311 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 OR10G2Q8NGC3 310 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 OR4D9Q8NGE8 314 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 OR5AP2Q8NGF4 316 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 OR5D16Q8NGK9 328 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 GPR151Q8TDV0 419 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 CDS1Q92903 461 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 RAB8BQ92930 207 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 RIT1Q92963 219 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 TAMM41Q96BW9 452 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 OMA1Q96E52 524 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 C10orf90Q96M02 699 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 ZNF681Q96N22 645 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 ZNF285Q96NJ3 590 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 SLC29A1Q99808 456 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 TREX2Q9BQ50 279 aaPredicted RBP4.15□□□□□ -1.75
VPS29-212ENST00000621131 PIGQQ9BRB3 760 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 GTPBP2Q9BX10 602 aaKnown RBP4.15□□□□□ -1.75
VPS29-212ENST00000621131 PRRG3Q9BZD7 231 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 FAM192AQ9GZU8 254 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 LRRN3Q9H3W5 708 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 PIGUQ9H490 435 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 RIBC2Q9H4K1 309 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 MTHFD2LQ9H903 347 aaPredicted RBP4.15□□□□□ -1.75
VPS29-212ENST00000621131 CHMP1AQ9HD42 196 aaPredicted RBP4.15□□□□□ -1.75
VPS29-212ENST00000621131 FAM60AQ9NP50 221 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 SCN3BQ9NY72 215 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 COPS7AQ9UBW8 275 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 RARRES3Q9UL19 164 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 ABCG2Q9UNQ0 655 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 SH3GLB1Q9Y371 365 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 MRPS2Q9Y399 296 aaKnown RBP4.15□□□□□ -1.75
VPS29-212ENST00000621131 WDR45Q9Y484 360 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 OR10H1Q9Y4A9 318 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 GMPPBQ9Y5P6 360 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 SNX5Q9Y5X3 404 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 HSPE1-MOB4S4R3N1 261 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 U3KQV3 271 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 SETD2Q9BYW2 2564 aaPredicted RBP4.15□□□□□ -1.75
VPS29-212ENST00000621131 ITPR2Q14571 2701 aa4.15□□□□□ -1.75
VPS29-212ENST00000621131 CROCCQ5TZA2 2017 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 LRBAP50851 2863 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 COL6A6A6NMZ7 2263 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 HEATR5BQ9P2D3 2071 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 TMX2-CTNND1H3BSU7 103 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 UPK1AO00322 258 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 SLC30A4O14863 429 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 ACOX3O15254 700 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 FLRT2O43155 660 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 MPZL2O60487 215 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 MITFO75030 526 aaPredicted RBP4.14□□□□□ -1.75
VPS29-212ENST00000621131 MFN2O95140 757 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 SNAP29O95721 258 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 CLDN1O95832 211 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 SP9P0CG40 484 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 HPGDP15428 266 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 GSTM3P21266 225 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 EEF1B2P24534 225 aaKnown RBP4.14□□□□□ -1.75
VPS29-212ENST00000621131 CD1CP29017 333 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 CSTF2P33240 577 aaKnown RBP eCLIP4.14□□□□□ -1.75
VPS29-212ENST00000621131 KRT20P35900 424 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 OR1E2P47887 323 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 RGS8P57771 180 aaPredicted RBP4.14□□□□□ -1.75
VPS29-212ENST00000621131 TAS2R41P59536 307 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 GABARAPL2P60520 117 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 CDC42P60953 191 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 DCAF7P61962 342 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 CSNK2BP67870 215 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 IGLV3-21P80748 117 aaPredicted RBP4.14□□□□□ -1.75
VPS29-212ENST00000621131 IL5RAQ01344 420 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 ST3GAL3Q11203 375 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 TRA2AQ13595 282 aaKnown RBP eCLIP4.14□□□□□ -1.75
VPS29-212ENST00000621131 GANABQ14697 944 aaKnown RBP4.14□□□□□ -1.75
VPS29-212ENST00000621131 LTB4RQ15722 352 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 MICAQ29983 383 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 EXOC3L2Q2M3D2 409 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 NHSL2Q5HYW2 709 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 DCST2Q5T1A1 773 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 MLIPQ5VWP3 458 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 DHRS4L2Q6PKH6 230 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 UGT2A3Q6UWM9 527 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 PRSS41Q7RTY9 318 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 OR4N5Q8IXE1 308 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 CDK20Q8IZL9 346 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 ZNF619Q8N2I2 560 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 SLC25A45Q8N413 288 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 EID2Q8N6I1 236 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 CHDHQ8NE62 594 aaPredicted RBP4.14□□□□□ -1.75
VPS29-212ENST00000621131 TSPAN14Q8NG11 270 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 OR7G2Q8NG99 324 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 OR52R1Q8NGF1 315 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 OR5T3Q8NGG3 340 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 OR10Q1Q8NGQ4 319 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 OR52P1PQ8NH57 321 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 OR51Q1Q8NH59 317 aa4.14□□□□□ -1.75
VPS29-212ENST00000621131 VANGL1Q8TAA9 524 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms