RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 PGBD2Q6P3X8 592 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 UNQ6126/PRO20091Q6UXV3 157 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 ZNF620Q6ZNG0 422 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 PTCHD4Q6ZW05 846 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 SYT9Q86SS6 491 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 LRP11Q86VZ4 500 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 DHFR2Q86XF0 187 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 ICA1LQ8NDH6 482 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 ZNF540Q8NDQ6 660 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 CCDC124Q96CT7 223 aaKnown RBP9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 ASB9Q96DX5 294 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 POM121L2Q96KW2 1035 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 BPESC1Q9GZL8 116 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 WNT5BQ9H1J7 359 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 C1orf21Q9H246 121 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 EMC7Q9NPA0 242 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 REV1Q9UBZ9 1251 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 DUSP13Q9UII6 198 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 TIMM10BQ9Y5J6 103 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 IER3IP1Q9Y5U9 82 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 LYVE1Q9Y5Y7 322 aa9.38□□□□□ -0.91
PPP4R1-208ENST00000578178 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.37□□□□□ -0.912e-7■■■■■ 27
PPP4R1-208ENST00000578178 LOC100509620A0A075B734 347 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 TNFRSF11BO00300 401 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 IMPA2O14732 288 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 ARPC3O15145 178 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 DOK2O60496 412 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 SLC16A7O60669 478 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 ICMTO60725 284 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 KHDRBS3O75525 346 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 STAMBPO95630 424 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 SCG5P05408 212 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 COX5BP10606 129 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 ZNF250P15622 560 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 WNT5AP41221 380 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 TSPAN31Q12999 210 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 AQP6Q13520 282 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 NKPD1Q17RQ9 610 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 RFX4Q33E94 735 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 C6orf52Q5T4I8 152 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 ZNF774Q6NX45 483 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 C1orf94Q6P1W5 598 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 DNM1P34Q6PK57 102 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 UGT2A3Q6UWM9 527 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 RFPL4BQ6ZWI9 263 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 TRPM8Q7Z2W7 1104 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 JAZF1Q86VZ6 243 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 GLB1L2Q8IW92 636 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 ZNF101Q8IZC7 436 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 ZNF786Q8N393 782 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 OR9Q2Q8NGE9 314 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 OR1J1Q8NGS3 322 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 SYNPRQ8TBG9 265 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 BCAS4Q8TDM0 211 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 GNPDA2Q8TDQ7 276 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 UBASH3BQ8TF42 649 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 SNX33Q8WV41 574 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 C11orf40Q8WZ69 217 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 POP5Q969H6 163 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 FOXN4Q96NZ1 517 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 ERMAPQ96PL5 475 aaPredicted RBP9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 SNX18Q96RF0 628 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 RERGLQ9H628 205 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 SLCO1C1Q9NYB5 712 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 TAS2R1Q9NYW7 299 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 TAAR3PQ9P1P4 343 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 EIF3KQ9UBQ5 218 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 GPR160Q9UJ42 338 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 NDRG4Q9ULP0 352 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 JMJD1CQ15652 2540 aa9.37□□□□□ -0.91
PPP4R1-208ENST00000578178 IGHV4-61A0A0C4DH41 118 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 H3BSA7 217 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 SGCEO43556 437 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 CLPTM1O96005 669 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 RENP00797 406 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 ZNF16P17020 682 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 GIFP27352 417 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 CRABP1P29762 137 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 CDKN2AP42771 156 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 HTR5AP47898 357 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 HMGA2P52926 109 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 LSM6P62312 80 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 MS4A2Q01362 244 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 ALKBH6Q3KRA9 238 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 FAM98BQ52LJ0 330 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 RPL13AP3Q6NVV1 102 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 PGM2L1Q6PCE3 622 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 C1orf174Q8IYL3 243 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 LINC00471Q8N535 108 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 OR52L1Q8NGH7 329 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 OR4C15Q8NGM1 316 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 SAMD8Q96LT4 415 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 LRGUKQ96M69 825 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 BTBD10Q9BSF8 475 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 IFT27Q9BW83 186 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 TRIM15Q9C019 465 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 NUAK2Q9H093 628 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 RACGAP1Q9H0H5 632 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 YAE1D1Q9NRH1 226 aa9.36□□□□□ -0.91
PPP4R1-208ENST00000578178 COA3Q9Y2R0 106 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms