RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 FADS1O60427 444 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 ZNF217O75362 1048 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 IGKV1D-16P01601 117 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 IGHV2-5P01817 119 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 OR4E1P0C645 316 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 NME1P15531 152 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 ZNF44P15621 663 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 HLA-GP17693 338 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 CAPZBP47756 277 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 AKR1C2P52895 323 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 IGLV3-21P80748 117 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 DEFA6Q01524 100 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 AKR1C1Q04828 323 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 SMAD4Q13485 552 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 ELOCQ15369 112 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 NKPD1Q17RQ9 610 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 AMZ1Q400G9 498 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 ACER2Q5QJU3 275 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 TMPRSS11FQ6ZWK6 438 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 SSX6Q7RTT6 188 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 DEFB119Q8N690 84 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 BOLLQ8N9W6 283 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 INO80EQ8NBZ0 244 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 GTF3AQ92664 365 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 ARSGQ96EG1 525 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 HSPA12BQ96MM6 686 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 POTEKPQ9BYX7 375 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 POFUT1Q9H488 388 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 ACKR4Q9NPB9 350 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 MED31Q9Y3C7 131 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 EYSQ5T1H1 3165 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 THADAQ6YHU6 1953 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 GON4LQ3T8J9 2241 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 A0A1W2PR77 199 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 BLOC1S5-TXNDC5H3BN57 136 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 HRKO00198 91 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 PIN1P1O15428 100 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 IFNGP01579 166 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 SELLP14151 372 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 IL9P15248 144 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 CD27P26842 260 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 SKP1P63208 163 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 GGTLC2Q14390 218 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 ZNHIT3Q15649 155 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 PLEKHN1Q494U1 663 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 ZNF595Q8IYB9 648 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 DND1Q8IYX4 353 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 ZNF433Q8N7K0 673 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 SDR9C7Q8NEX9 313 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 OR4N2Q8NGD1 307 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 OR51S1Q8NGJ8 323 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 OR4A4PQ8NGN8 299 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 LMX1AQ8TE12 382 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 BPIFA2Q96DR5 249 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 VSTM2LQ96N03 204 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 GAL3ST1Q99999 423 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 PHF7Q9BWX1 381 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 CHRDQ9H2X0 955 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 TUBA4BQ9H853 241 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 SEC61A2Q9H9S3 476 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 FLRT3Q9NZU0 649 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 FBXL4Q9UKA2 621 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 SPTBP11277 2137 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 A0A0B4J2E0 115 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 A0A1B0GX12 115 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 BLACEA4D250 179 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 LILRA5A6NI73 299 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 ARGFXA6NJG6 315 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 RHPN2P1A8MT19 583 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 GTF2F2P13984 249 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 CBR1P16152 277 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 GABRA4P48169 554 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 ACTBP60709 375 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 RAB2AP61019 212 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 ACTG1P63261 375 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 TDGQ13569 410 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 HMGN3Q15651 99 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 SLC6A19Q695T7 634 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 GKN2Q86XP6 184 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 CDK20Q8IZL9 346 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 OR5AP2Q8NGF4 316 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 OR13C2Q8NGS9 318 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 OR4C6Q8NH72 309 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 GRHL3Q8TE85 626 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 PAQR8Q8TEZ7 354 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 HIST1H2BAQ96A08 127 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 PIK3IP1Q96FE7 263 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 RBM18Q96H35 190 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 TAAR9Q96RI9 348 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 CNN2Q99439 309 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 PFDN5Q99471 154 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 SMAD5Q99717 465 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 MEPEQ9NQ76 525 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 PRTFDC1Q9NRG1 225 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 DNAJB12Q9NXW2 375 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 NCDNQ9UBB6 729 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 ASH2LQ9UBL3 628 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 MRPS33Q9Y291 106 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 ZNF281Q9Y2X9 895 aa12.61□□□□□ -0.39
RABGGTA-220ENST00000560998 CLDN16Q9Y5I7 305 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms