RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ELF3P78545 371 aaPredicted RBP16.86■□□□□ 0.29
DDX55-207ENST00000540763 SPOCK1Q08629 439 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 RAB39AQ14964 217 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 TMEM236Q5W0B7 351 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 C12orf73Q69YU5 71 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 PAMR1Q6UXH9 720 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 MYPOPQ86VE0 399 aaPredicted RBP16.86■□□□□ 0.29
DDX55-207ENST00000540763 ZNF584Q8IVC4 421 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 ZNF611Q8N823 705 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 OR4F15Q8NGB8 312 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 LILRB1Q8NHL6 650 aaPredicted RBP16.86■□□□□ 0.29
DDX55-207ENST00000540763 AKAP1Q92667 903 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDX55-207ENST00000540763 FBXW5Q969U6 566 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 EMC7Q9NPA0 242 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 ATPIF1Q9UII2 106 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 PDZD2O15018 2839 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 DSCAMO60469 2012 aa16.86■□□□□ 0.29
DDX55-207ENST00000540763 IGHV2OR16-5A0A0B4J2B6 119 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 PRR23D1E9PI22 279 aaPredicted RBP16.85■□□□□ 0.29
DDX55-207ENST00000540763 PRODHO43272 600 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 SNAP29O95721 258 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 PRR23D2P0DMB1 279 aaPredicted RBP16.85■□□□□ 0.29
DDX55-207ENST00000540763 COX5BP10606 129 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 PSG4Q00888 419 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 PABPC1L2AQ5JQF8 200 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 ZBTB49Q6ZSB9 765 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 ALDH16A1Q8IZ83 802 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 NUP37Q8NFH4 326 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 OR10H5Q8NGA6 315 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 OR9Q1Q8NGQ5 310 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 OR1J2Q8NGS2 313 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 NINJ1Q92982 152 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 OR2H1Q9GZK4 316 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 DCLRE1BQ9H816 532 aa16.85■□□□□ 0.29
DDX55-207ENST00000540763 PLCE1Q9P212 2302 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 ATP6V1G2-DDX39BF2Z307 99 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 TMCC2O75069 709 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 MPZL1O95297 269 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 TFP02787 698 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 ZNF35P13682 527 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 CALCRP30988 508 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 FMO3P31513 532 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 TEKQ02763 1124 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 SNAPC1Q16533 368 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 TBC1D28Q2M2D7 210 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 SLC35D3Q5M8T2 416 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 UGT2A3Q6UWM9 527 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 SLC30A7Q8NEW0 376 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 PTP4A1Q93096 173 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 MS4A3Q96HJ5 214 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 RDH12Q96NR8 316 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 FOXN4Q96NZ1 517 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 WNT5BQ9H1J7 359 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 HINT3Q9NQE9 182 aaKnown RBP16.84■□□□□ 0.29
DDX55-207ENST00000540763 TVP23BQ9NYZ1 205 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 ASH2LQ9UBL3 628 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 POU2F3Q9UKI9 436 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 POLR1DQ9Y2S0 133 aa16.84■□□□□ 0.29
DDX55-207ENST00000540763 FAM183AA6NL82 134 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 E9PQ18 207 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 GLCEO94923 617 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 HLA-DQA2P01906 255 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 EPHA2P29317 976 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 PYCR1P32322 319 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 HIST1H3AP68431 136 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 EFNB1P98172 346 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 HIST2H3PS2Q5TEC6 136 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 LINC01590Q5TEZ4 76 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 ZNF544Q6NX49 715 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 HIST2H3AQ71DI3 136 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 HRASLS5Q96KN8 279 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 HCAR1Q9BXC0 346 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 GRIP2Q9C0E4 1043 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 RIBC2Q9H4K1 309 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 MARCH7Q9H992 704 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 UBTD1Q9HAC8 227 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 FAIMQ9NVQ4 179 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 MRPL22Q9NWU5 206 aaKnown RBP16.83■□□□□ 0.28
DDX55-207ENST00000540763 CISD1Q9NZ45 108 aaKnown RBP16.83■□□□□ 0.28
DDX55-207ENST00000540763 ST6GALNAC2Q9UJ37 374 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 NDRG4Q9ULP0 352 aaKnown RBP16.83■□□□□ 0.28
DDX55-207ENST00000540763 LHFPL6Q9Y693 200 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 COMMD3-BMI1R4GMX3 469 aa16.83■□□□□ 0.28
DDX55-207ENST00000540763 CSMD2Q7Z408 3487 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 CASQ2O14958 399 aaPredicted RBP16.82■□□□□ 0.28
DDX55-207ENST00000540763 SGCEO43556 437 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 GPANK1O95872 356 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 RAF1P04049 648 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 GYPBP06028 91 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 CLUP10909 449 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 ZNF823P16415 610 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 APLNRP35414 380 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 GGT2P36268 569 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 RIPPLY3P57055 190 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 PCK2Q16822 640 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 TEX30Q5JUR7 227 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 PLBD1Q6P4A8 553 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 CXXC5Q7LFL8 322 aaKnown RBP16.82■□□□□ 0.28
DDX55-207ENST00000540763 CPOQ8IVL8 374 aa16.82■□□□□ 0.28
DDX55-207ENST00000540763 PACRGLQ8N7B6 248 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms