RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PYDC1Q8WXC3 89 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 C11orf40Q8WZ69 217 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 PERPQ96FX8 193 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 WACQ9BTA9 647 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 BDH2Q9BUT1 245 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 OR2H1Q9GZK4 316 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 C1orf198Q9H425 327 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 ZNF442Q9H7R0 627 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 TIMM10BQ9Y5J6 103 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 FKBP7Q9Y680 259 aa19.64■□□□□ 0.73
SFSWAP-204ENST00000535399 ARID1AO14497 2285 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 IQCMA0A1B0GVH7 501 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 H3BN98 237 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 PTHP01270 115 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 CCL2P13500 99 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 APEX1P27695 318 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 THBS4P35443 961 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 DAPP51397 102 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 LSM6P62312 80 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 SNTB2Q13425 540 aaKnown RBP19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 DAG1Q14118 895 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 ADIPOQQ15848 244 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 MST1LQ2TV78 715 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 VHLLQ6RSH7 139 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 IQCF1Q8N6M8 205 aa19.63■□□□□ 0.73
SFSWAP-204ENST00000535399 POU1F1P28069 291 aa19.62■□□□□ 0.73
SFSWAP-204ENST00000535399 GRK5P34947 590 aa19.62■□□□□ 0.73
SFSWAP-204ENST00000535399 CDKN1AP38936 164 aa19.62■□□□□ 0.73
SFSWAP-204ENST00000535399 CENPAP49450 140 aa19.62■□□□□ 0.73
SFSWAP-204ENST00000535399 HIPK1Q86Z02 1210 aa19.62■□□□□ 0.73
SFSWAP-204ENST00000535399 DNAJC9Q8WXX5 260 aa19.62■□□□□ 0.73
SFSWAP-204ENST00000535399 RBM4Q9BWF3 364 aaKnown RBP19.62■□□□□ 0.73
SFSWAP-204ENST00000535399 KLHL21Q9UJP4 597 aa19.62■□□□□ 0.73
SFSWAP-204ENST00000535399 FAM171A2A8MVW0 826 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 H3BNX3 289 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 GPRIN2O60269 458 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 SNAP29O95721 258 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 OR4A8P0C604 315 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 APLNRP35414 380 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 SERPINF1P36955 418 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 CRMP1Q14194 572 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 GINS1Q14691 196 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 MEP1BQ16820 701 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 MSMPQ1L6U9 139 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 SWI5Q1ZZU3 235 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 TBC1D28Q2M2D7 210 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 ACSM5Q6NUN0 579 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 ZNF774Q6NX45 483 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 SLC27A4Q6P1M0 643 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 SLC26A10Q8NG04 563 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 OR1J2Q8NGS2 313 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 CENPNQ96H22 339 aaPredicted RBP19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 POM121L2Q96KW2 1035 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 RAB3IPQ96QF0 476 aaPredicted RBP19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 NMNAT2Q9BZQ4 307 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 CDH20Q9HBT6 801 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 CMC2Q9NRP2 79 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 SPEF1Q9Y4P9 236 aa19.61■□□□□ 0.73
SFSWAP-204ENST00000535399 LOC100509620A0A075B734 347 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 G3V2T6 193 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 TFP02787 698 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 STOMP27105 288 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 PYCR1P32322 319 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 SLC25A1P53007 311 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 GALK2Q01415 458 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 GLO1Q04760 184 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 SCRN3Q0VDG4 424 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 AQP6Q13520 282 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 EFNB3Q15768 340 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 ZDHHC13Q8IUH4 622 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 PARP8Q8N3A8 854 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 ZNRF4Q8WWF5 429 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 CACNG6Q9BXT2 260 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 GABARAPL1Q9H0R8 117 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 SEMA6AQ9H2E6 1030 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 PAPOLBQ9NRJ5 636 aaKnown RBP19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 KIF17Q9P2E2 1029 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 ASH2LQ9UBL3 628 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 RTTNQ86VV8 2226 aa19.6■□□□□ 0.73
SFSWAP-204ENST00000535399 IFNGP01579 166 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 ZNF23P17027 643 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 GLRXP35754 106 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 ATP5J2P56134 94 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 ADAM8P78325 824 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 CDK5Q00535 292 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 SHEQ5VZ18 495 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 ZFP1Q6P2D0 407 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 ALDH16A1Q8IZ83 802 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 SVOPLQ8N434 492 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 OR9Q1Q8NGQ5 310 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 OR2T4Q8NH00 348 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 MAP1AP78559 2803 aaPredicted RBP19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 ITPR3Q14573 2671 aa19.59■□□□□ 0.73
SFSWAP-204ENST00000535399 TMEM129A0AVI4 362 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 RIIAD1A6NNX1 92 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 PCSK6P29122 969 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 GDI2P50395 445 aaKnown RBP19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 TEKQ02763 1124 aa19.58■□□□□ 0.72
SFSWAP-204ENST00000535399 CCDC92Q53HC0 331 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms