RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 MRPS34P82930 218 aaKnown RBP17■□□□□ 0.31
SQSTM1-215ENST00000514093 FMODQ06828 376 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 NPTX1Q15818 432 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 FBLN7Q53RD9 439 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 ENTPD8Q5MY95 495 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 C10orf128Q5T292 105 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 ZNF774Q6NX45 483 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 NANOGNBQ7Z5D8 188 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 RBM45Q8IUH3 476 aaKnown RBP17■□□□□ 0.31
SQSTM1-215ENST00000514093 FAM110DQ8TAY7 271 aaPredicted RBP17■□□□□ 0.31
SQSTM1-215ENST00000514093 RAB40AQ8WXH6 277 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 ASB10Q8WXI3 467 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 C4orf45Q96LM5 186 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 OR52B2Q96RD2 323 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 SEPHS2Q99611 448 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 PRDM13Q9H4Q3 707 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 KCNK9Q9NPC2 374 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 NBEAL2Q6ZNJ1 2754 aa17■□□□□ 0.31
SQSTM1-215ENST00000514093 A0A1W2PRG6 482 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 TMEM178BH3BS89 294 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 UBDO15205 165 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 FMO6PO60774 539 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 SERPINB7O75635 380 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 RPS2P15880 293 aaKnown RBP16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 TNFSF4P23510 183 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 SLC6A2P23975 617 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 GNB2P62879 340 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 TAF9Q16594 264 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 RUNDC3AQ59EK9 446 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 RUSC1-AS1Q66K80 236 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 Q6YL49 198 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 OR6T1Q8NGN1 323 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 MAELQ96JY0 434 aaKnown RBP16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 OR2H1Q9GZK4 316 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 IKZF5Q9H5V7 419 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 SLC7A7Q9UM01 511 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 RNF114Q9Y508 228 aa16.99■□□□□ 0.31
SQSTM1-215ENST00000514093 OPN1SWP03999 348 aa16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 ARHGDIAP52565 204 aa16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 ZNF133P52736 654 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 UGT2B15P54855 530 aa16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 RPL18Q07020 188 aaKnown RBP16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 DUSP7Q16829 419 aa16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 KRT71Q3SY84 523 aa16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 TSPYL5Q86VY4 417 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 KLBQ86Z14 1044 aa16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 C1orf174Q8IYL3 243 aa16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 MUC20Q8N307 709 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 OR4D11Q8NGI4 311 aa16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 THOC1Q96FV9 657 aaKnown RBP16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 OR2V2Q96R30 315 aa16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 ELOVL3Q9HB03 270 aa16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 TMEM165Q9HC07 324 aa16.98■□□□□ 0.31
SQSTM1-215ENST00000514093 KIR2DS1A0A191URI9 304 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 SLC22A31A6NKX4 558 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 H3BSA7 217 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 RGS16O15492 202 aaPredicted RBP16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 LAP3P28838 519 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 MMP16P51512 607 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 HLXQ14774 488 aaPredicted RBP16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 MAVSQ7Z434 540 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 ZER1Q7Z7L7 766 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 ALDH16A1Q8IZ83 802 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 VANGL1Q8TAA9 524 aaPredicted RBP16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 ZNF420Q8TAQ5 688 aaPredicted RBP16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 ADAMTS16Q8TE57 1224 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 HDAC2Q92769 488 aaKnown RBP16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 DACT3Q96B18 629 aaPredicted RBP16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 SSU72Q9NP77 194 aaKnown RBP16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 VAPAQ9P0L0 249 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 IL19Q9UHD0 177 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 ANGPT4Q9Y264 503 aa16.97■□□□□ 0.31
SQSTM1-215ENST00000514093 CYB5R3P00387 301 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 MELTFP08582 738 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 AQP2P41181 271 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 FGF12P61328 243 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 VSNL1P62760 191 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 LRIF1Q5T3J3 769 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 FAM27BQ5VT28 67 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 SLC27A4Q6P1M0 643 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 GPR32P1Q8NGA4 272 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 MOSPD2Q8NHP6 518 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 LINC01006Q8NI28 216 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 NMD3Q96D46 503 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 CMBLQ96DG6 245 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 SLC30A2Q9BRI3 323 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 NUDT16L1Q9BRJ7 211 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 TMEM109Q9BVC6 243 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 TMEM38AQ9H6F2 299 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 GCM1Q9NP62 436 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 NOX4Q9NPH5 578 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 MEPEQ9NQ76 525 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 MAN2C1Q9NTJ4 1040 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 THAP1Q9NVV9 213 aa16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-215ENST00000514093 IGHV3-64DA0A0J9YX35 117 aa16.95■□□□□ 0.3
SQSTM1-215ENST00000514093 CENPBD1B2RD01 187 aa16.95■□□□□ 0.3
SQSTM1-215ENST00000514093 ICMTO60725 284 aa16.95■□□□□ 0.3
SQSTM1-215ENST00000514093 ABHD16AO95870 558 aa16.95■□□□□ 0.3
SQSTM1-215ENST00000514093 ERFP50548 548 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms