RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CSNK1G2P78368 415 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 XIAPP98170 497 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 SLC25A11Q02978 314 aaKnown RBP1.66□□□□□ -2.14
LMNB1-207ENST00000494185 MECOMQ03112 1051 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 RCAN2Q14206 197 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 CLINT1Q14677 625 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 USF2Q15853 346 aaPredicted RBP1.66□□□□□ -2.14
LMNB1-207ENST00000494185 PSMD5Q16401 504 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 TRMT5Q32P41 509 aaKnown RBP1.66□□□□□ -2.14
LMNB1-207ENST00000494185 KRTAP13-3Q3SY46 172 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 TPRG1LQ5T0D9 272 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 GPR157Q5UAW9 335 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF620Q6ZNG0 422 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 TIFABQ6ZNK6 161 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 H2AFVQ71UI9 128 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 TMEM150AQ86TG1 271 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 IQCF2Q8IXL9 164 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 ZADH2Q8N4Q0 377 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 FBXO36Q8NEA4 188 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 OR4A15Q8NGL6 344 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 OR10G9Q8NGN4 311 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 OR1N2Q8NGR9 330 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 OR9G1Q8NH87 305 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 NUBPLQ8TB37 319 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 ITFG1Q8TB96 612 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 ZNF596Q8TC21 504 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 C7orf33Q8WU49 177 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 FAM131CQ96AQ9 280 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 DNAJC1Q96KC8 554 aaKnown RBP1.66□□□□□ -2.14
LMNB1-207ENST00000494185 FCRL1Q96LA6 429 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 NAT9Q9BTE0 207 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 OR52A5Q9H2C5 316 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 TMEM38AQ9H6F2 299 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 RETNQ9HD89 108 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 DMAP1Q9NPF5 467 aaPredicted RBP1.66□□□□□ -2.14
LMNB1-207ENST00000494185 AIG1Q9NVV5 245 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 CD274Q9NZQ7 290 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 CHMP5Q9NZZ3 219 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 IL17CQ9P0M4 197 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 CLCF1Q9UBD9 225 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 FLVCR2Q9UPI3 526 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 RCL1Q9Y2P8 373 aaKnown RBP1.66□□□□□ -2.14
LMNB1-207ENST00000494185 YARS2Q9Y2Z4 477 aaKnown RBP1.66□□□□□ -2.14
LMNB1-207ENST00000494185 NEUROG3Q9Y4Z2 214 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 GMEB1Q9Y692 573 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 KCNE3Q9Y6H6 103 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 AQRO60306 1485 aaKnown RBP eCLIP1.66□□□□□ -2.143e-7■■■■■ 27.8
LMNB1-207ENST00000494185 ARHGAP23Q9P227 1491 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 ASTN1O14525 1302 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 UBN2Q6ZU65 1347 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 MAPK8IP3Q9UPT6 1336 aa1.66□□□□□ -2.14
LMNB1-207ENST00000494185 PRRC2AP48634 2157 aaKnown RBP1.65□□□□□ -2.14
LMNB1-207ENST00000494185 MSH6P52701 1360 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 IGKV1D-13A0A0B4J2D9 117 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 A0A0G2JLM5 398 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF816-ZNF321PA0A0X1KG74 233 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 A0A1W2PRF3 423 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 A0A1W2PRM7 423 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 WI2-2373I1.2A0A1W2PRP0 233 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 PRSS37A4D1T9 235 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 PDZK1P1A8MUH7 402 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 KRTAP4-16G5E9R7 235 aaPredicted RBP1.65□□□□□ -2.15
LMNB1-207ENST00000494185 H0YHG0 523 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 SMKR1H3BMG3 65 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 K7EMT4 169 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 RAD51CO43502 376 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 VAPBO95292 243 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 LSM8O95777 96 aaKnown RBP1.65□□□□□ -2.15
LMNB1-207ENST00000494185 C6orf47O95873 294 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 IGKV3-11P04433 115 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 KRT16P08779 473 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 GKN3PP0CG01 181 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 IGHV3-43DP0DP04 118 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 IGKV1-13P0DP09 117 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 FOLR1P15328 257 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 HPGDP15428 266 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF250P15622 560 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 ELK1P19419 428 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 RAB4AP20338 218 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 COX7A1P24310 79 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 FMO3P31513 532 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 GPX4P36969 197 aaPredicted RBP1.65□□□□□ -2.15
LMNB1-207ENST00000494185 GPR4P46093 362 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 RORCP51449 518 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 CLDN6P56747 220 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 TAS2R39P59534 338 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 PSMC5P62195 406 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 RPS15AP62244 130 aaKnown RBP1.65□□□□□ -2.15
LMNB1-207ENST00000494185 TGFBR3Q03167 851 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 PDIA2Q13087 525 aaKnown RBP1.65□□□□□ -2.15
LMNB1-207ENST00000494185 EIF4EBP2Q13542 120 aaPredicted RBP1.65□□□□□ -2.15
LMNB1-207ENST00000494185 KIAA0087Q14695 138 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 C16orf72Q14CZ0 275 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 OR7A5Q15622 319 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF726P1Q15940 193 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF658BQ4V348 819 aaPredicted RBP1.65□□□□□ -2.15
LMNB1-207ENST00000494185 CLEC6AQ6EIG7 209 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 PRMT9Q6P2P2 845 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 CNIH2Q6PI25 160 aa1.65□□□□□ -2.15
LMNB1-207ENST00000494185 DEGS2Q6QHC5 323 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms