RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ZNF133P52736 654 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-232ENST00000489053 UCP2P55851 309 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 MAD2L1BPQ15013 274 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-232ENST00000489053 FAM98BQ52LJ0 330 aaKnown RBP7.85□□□□□ -1.15
HDAC6-232ENST00000489053 SPATA46Q5T0L3 261 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 C6orf52Q5T4I8 152 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 PGM2L1Q6PCE3 622 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 UGT2A3Q6UWM9 527 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 CYP2R1Q6VVX0 501 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 ZER1Q7Z7L7 766 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 LRP11Q86VZ4 500 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 DHFR2Q86XF0 187 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF786Q8N393 782 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 LINC00471Q8N535 108 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 FAM86B1Q8N7N1 296 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 CLDN22Q8N7P3 220 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 RDH5Q92781 318 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 RASD2Q96D21 266 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 ERMAPQ96PL5 475 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-232ENST00000489053 SNX18Q96RF0 628 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 WACQ9BTA9 647 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF416Q9BWM5 594 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 BPESC1Q9GZL8 116 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 SYT4Q9H2B2 425 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 MUC13Q9H3R2 512 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 EMC7Q9NPA0 242 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 POLE4Q9NR33 117 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 PLEK2Q9NYT0 353 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 LPAR3Q9UBY5 353 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 UGT2A1Q9Y4X1 527 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 ALPK2Q86TB3 2170 aa7.85□□□□□ -1.15
HDAC6-232ENST00000489053 FN1P02751 2386 aaKnown RBP7.85□□□□□ -1.15
HDAC6-232ENST00000489053 TNFRSF11BO00300 401 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 SGCEO43556 437 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 TIMM8AO60220 97 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-232ENST00000489053 DOK2O60496 412 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 PPP1R3DO95685 299 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 TGFAP01135 160 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 HLA-DQA2P01906 255 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 MMP7P09237 267 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF23P17027 643 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 TNFSF4P23510 183 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 FPR3P25089 353 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 PSG4Q00888 419 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 AQP6Q13520 282 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 SEC23BQ15437 767 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 FXNQ16595 210 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 SLC36A3Q495N2 470 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 MESTQ5EB52 335 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 RPL13AP3Q6NVV1 102 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF774Q6NX45 483 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 LEG1Q6P5S2 330 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 SYT9Q86SS6 491 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 PAQR4Q8N4S7 273 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-232ENST00000489053 LRRC75AQ8NAA5 344 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 GNPDA2Q8TDQ7 276 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 CCDC124Q96CT7 223 aaKnown RBP7.84□□□□□ -1.15
HDAC6-232ENST00000489053 TIMD4Q96H15 378 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 C7orf34Q96L11 122 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 COG8Q96MW5 612 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 CDADC1Q9BWV3 514 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 EGLN1Q9GZT9 426 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 REEP1Q9H902 201 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 CYSLTR2Q9NS75 346 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 ACTR3BQ9P1U1 418 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 SIGLEC7Q9Y286 467 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 GRIP1Q9Y3R0 1128 aa7.84□□□□□ -1.15
HDAC6-232ENST00000489053 MXRA5Q9NR99 2828 aa7.84□□□□□ -1.16
HDAC6-232ENST00000489053 IGKV1D-43A0A0B4J1Z2 117 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 IGHV4-61A0A0C4DH41 118 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 TMEM129A0AVI4 362 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 C17orf100A8MU93 164 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 GNGT2O14610 69 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 IMPA2O14732 288 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 LMX1BO60663 402 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 CDC14BO60729 498 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 CCNB2O95067 398 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 CLPTM1O96005 669 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 IGHV4-31P0DP07 118 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF250P15622 560 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 CTLA4P16410 223 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 ACHEP22303 614 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 GIFP27352 417 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 LIPAP38571 399 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 OMPP47874 163 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 LIMS1P48059 325 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 ZNF81P51508 661 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 CDH15P55291 814 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 ERVS71-1P61550 626 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 PPP1CBP62140 327 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 CCL8P80075 99 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 CCNIQ14094 377 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 HFEQ30201 348 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 RFX4Q33E94 735 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 CLEC12AQ5QGZ9 265 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 C1orf94Q6P1W5 598 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 PEG10Q86TG7 708 aaKnown RBP7.83□□□□□ -1.16
HDAC6-232ENST00000489053 FITM2Q8N6M3 262 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 NPEPL1Q8NDH3 523 aa7.83□□□□□ -1.16
HDAC6-232ENST00000489053 OR5L1Q8NGL2 311 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms