RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SLIT2O94813 1529 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 RBBP6Q7Z6E9 1792 aaKnown RBP3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 ARAP2Q8WZ64 1704 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 AKAP11Q9UKA4 1901 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 CAMTA1Q9Y6Y1 1673 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 NOTCH3Q9UM47 2321 aa3.01□□□□□ -1.93
ECHDC1-217ENST00000488087 DIP2BQ9P265 1576 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 LAMB2P55268 1798 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 ARFGEF2Q9Y6D5 1785 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 MEGF6O75095 1541 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 COL24A1Q17RW2 1714 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 FAM230AA0A1W2PPH8 454 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF840PA6NDX5 716 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 PRORSD1PA6NEY8 169 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 TRABD2BA6NFA1 517 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 B4DXG7 233 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 SGK494L7N484 410 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 DNASE2O00115 360 aaPredicted RBP3□□□□□ -1.93
ECHDC1-217ENST00000488087 LGALS8O00214 317 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 BCL2L11O43521 198 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 PRKAB2O43741 272 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 NUDT21O43809 227 aaKnown RBP3□□□□□ -1.93
ECHDC1-217ENST00000488087 CST8O60676 142 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 ZNF354AO60765 605 aaPredicted RBP3□□□□□ -1.93
ECHDC1-217ENST00000488087 HUS1O60921 280 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 MTX2O75431 263 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 VPS26AO75436 327 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 SCO1O75880 301 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 RBBP9O75884 186 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 STK17BO94768 372 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 NDUFA7O95182 113 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 LALBAP00709 142 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 TNNC2P02585 160 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 C2P06681 752 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 SLC35G4P0C7Q5 338 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 THRBP10828 461 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 MYL9P24844 172 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 PRDX2P32119 198 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 TGFBR2P37173 567 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 MAGEA3P43357 314 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 OR1G1P47890 313 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 POU3F4P49335 361 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 ACOT2P49753 483 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 P2RY4P51582 365 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 SGSHP51688 502 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 CDH4P55283 916 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 MYL6P60660 151 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 SLC35A2P78381 396 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 EMX1Q04741 257 aaPredicted RBP3□□□□□ -1.93
ECHDC1-217ENST00000488087 FGL1Q08830 312 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 BTN1A1Q13410 526 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 SGCAQ16586 387 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 GUCA2BQ16661 112 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 PPP1R3AQ16821 1122 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 RNF212Q495C1 297 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 SPANXN2Q5MJ10 180 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 LIPKQ5VXJ0 399 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 NXNL2Q5VZ03 156 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 STEAP4Q687X5 459 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 PYHIN1Q6K0P9 492 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 ATRAIDQ6UW56 229 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 PAQR9Q6ZVX9 377 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 EFL1Q7Z2Z2 1120 aaKnown RBP3□□□□□ -1.93
ECHDC1-217ENST00000488087 C16orf62Q7Z3J2 963 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 SNX29P2Q8IUI4 249 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 YIPF7Q8N8F6 280 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 FAM83FQ8NEG4 500 aaPredicted RBP3□□□□□ -1.93
ECHDC1-217ENST00000488087 STEAP2Q8NFT2 490 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 OR52E4Q8NGH9 312 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 OR52K1Q8NGK4 314 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 OR6T1Q8NGN1 323 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 WDR36Q8NI36 951 aaKnown RBP3□□□□□ -1.93
ECHDC1-217ENST00000488087 AGR3Q8TD06 166 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 RAET1EQ8TD07 263 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 CYGBQ8WWM9 190 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 HGDQ93099 445 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 TCEAL3Q969E4 200 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 NTAN1Q96AB6 310 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 BIRC7Q96CA5 298 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 SLC25A36Q96CQ1 311 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 RAB3CQ96E17 227 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 MRPL48Q96GC5 212 aaKnown RBP3□□□□□ -1.93
ECHDC1-217ENST00000488087 C7orf34Q96L11 122 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 PPP1R2P1Q96PQ5 205 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 KLF6Q99612 283 aaPredicted RBP3□□□□□ -1.93
ECHDC1-217ENST00000488087 APOL2Q9BQE5 337 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 MED18Q9BUE0 208 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 ST6GALNAC5Q9BVH7 336 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 MND1Q9BWT6 205 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 IL22Q9GZX6 179 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 ILKAPQ9H0C8 392 aaPredicted RBP3□□□□□ -1.93
ECHDC1-217ENST00000488087 ING2Q9H160 280 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 DCSTAMPQ9H295 470 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 PIGUQ9H490 435 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 RIBC2Q9H4K1 309 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 MRPL47Q9HD33 250 aaKnown RBP3□□□□□ -1.93
ECHDC1-217ENST00000488087 C6orf50Q9HD87 102 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 NRN1Q9NPD7 142 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 STARD5Q9NSY2 213 aa3□□□□□ -1.93
ECHDC1-217ENST00000488087 EXD2Q9NVH0 621 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms