RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SYT4Q9H2B2 425 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 OR52D1Q9H346 318 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 MS4A5Q9H3V2 200 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 RERGLQ9H628 205 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 YAE1D1Q9NRH1 226 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 VSX1Q9NZR4 365 aaPredicted RBP11.06□□□□□ -0.64
HDAC1-209ENST00000484305 TMCC3Q9ULS5 477 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 JMJD1CQ15652 2540 aa11.06□□□□□ -0.64
HDAC1-209ENST00000484305 IGLV3-9A0A075B6K5 115 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 IGHV4-61A0A0C4DH41 118 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 A0A1W2PPW3 197 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 C12orf71A8MTZ7 269 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 TLX2O43763 284 aaPredicted RBP11.05□□□□□ -0.64
HDAC1-209ENST00000484305 PPP1R3DO95685 299 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 TXNDC12O95881 172 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 FPR3P25089 353 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 GIFP27352 417 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 MAGEA2P43356 314 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 GSSP48637 474 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 GDI2P50395 445 aaKnown RBP11.05□□□□□ -0.64
HDAC1-209ENST00000484305 RPS6KA3P51812 740 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 KLF3P57682 345 aaPredicted RBP11.05□□□□□ -0.64
HDAC1-209ENST00000484305 TRIM25Q14258 630 aaKnown RBP11.05□□□□□ -0.64
HDAC1-209ENST00000484305 RFX4Q33E94 735 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 MTX3Q5HYI7 312 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 LCN8Q6JVE9 175 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 C1orf94Q6P1W5 598 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 DHFR2Q86XF0 187 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 ALDH16A1Q8IZ83 802 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 ARHGAP24Q8N264 748 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 ZNF786Q8N393 782 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 OR1J1Q8NGS3 322 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 SYNPRQ8TBG9 265 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 FANK1Q8TC84 345 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 UBASH3BQ8TF42 649 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 C11orf40Q8WZ69 217 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 ERMAPQ96PL5 475 aaPredicted RBP11.05□□□□□ -0.64
HDAC1-209ENST00000484305 BPESC1Q9GZL8 116 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 NUAK2Q9H093 628 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 TAS2R1Q9NYW7 299 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 TAAR3PQ9P1P4 343 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 COA3Q9Y2R0 106 aaPredicted RBP11.05□□□□□ -0.64
HDAC1-209ENST00000484305 LYVE1Q9Y5Y7 322 aa11.05□□□□□ -0.64
HDAC1-209ENST00000484305 DCTN6O00399 190 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 CRLF1O75462 422 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 KHDRBS3O75525 346 aaKnown RBP11.04□□□□□ -0.64
HDAC1-209ENST00000484305 KRT36O76013 467 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 MPZL1O95297 269 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 HPXP02790 462 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 IGHV4-31P0DP07 118 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 APEHP13798 732 aaKnown RBP11.04□□□□□ -0.64
HDAC1-209ENST00000484305 HMGA2P52926 109 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 DBPQ10586 325 aaPredicted RBP11.04□□□□□ -0.64
HDAC1-209ENST00000484305 NKPD1Q17RQ9 610 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 ELFN2Q5R3F8 820 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 SPATA46Q5T0L3 261 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 C6orf52Q5T4I8 152 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 PGBD2Q6P3X8 592 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 SYT9Q86SS6 491 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 ADCK1Q86TW2 530 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 PRIMA1Q86XR5 153 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 GLB1L2Q8IW92 636 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 GNPDA2Q8TDQ7 276 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 CLPTM1LQ96KA5 538 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 SAMD8Q96LT4 415 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 TSSK2Q96PF2 358 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 BTBD10Q9BSF8 475 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 MUC13Q9H3R2 512 aa11.04□□□□□ -0.64
HDAC1-209ENST00000484305 EIF3KQ9UBQ5 218 aaKnown RBP11.04□□□□□ -0.64
HDAC1-209ENST00000484305 A8MV72 311 aaPredicted RBP11.03□□□□□ -0.64
HDAC1-209ENST00000484305 TNFRSF11BO00300 401 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 ARPC3O15145 178 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 NCR1O76036 304 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 GPANK1O95872 356 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 NGFP01138 241 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 HIST1H1CP16403 213 aaKnown RBP11.03□□□□□ -0.64
HDAC1-209ENST00000484305 COL8A2P25067 703 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 SLC6A6P31641 620 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 IFNGR2P38484 337 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 MPV17P39210 176 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 SELENOVP59797 346 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 GLO1Q04760 184 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 PPP1R8Q12972 351 aaKnown RBP11.03□□□□□ -0.64
HDAC1-209ENST00000484305 TSPAN31Q12999 210 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 RIN1Q13671 783 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 TMEM255AQ5JRV8 349 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 CYB5R2Q6BCY4 276 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 RFPL4BQ6ZWI9 263 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 ZNF540Q8NDQ6 660 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 OR9Q2Q8NGE9 314 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 OR4C15Q8NGM1 316 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 SLC25A40Q8TBP6 338 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 GTF3AQ92664 365 aaKnown RBP11.03□□□□□ -0.64
HDAC1-209ENST00000484305 CCDC124Q96CT7 223 aaKnown RBP11.03□□□□□ -0.64
HDAC1-209ENST00000484305 MARS2Q96GW9 593 aaKnown RBP11.03□□□□□ -0.64
HDAC1-209ENST00000484305 NMNAT3Q96T66 252 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 WACQ9BTA9 647 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 IFT27Q9BW83 186 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 C1orf21Q9H246 121 aa11.03□□□□□ -0.64
HDAC1-209ENST00000484305 MAGIXQ9H6Y5 334 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms