RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 CRMP1Q14194 572 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 ENDOGQ14249 297 aaKnown RBP9.39□□□□□ -0.91
ATG4B-219ENST00000479941 PTGES3Q15185 160 aaKnown RBP9.39□□□□□ -0.91
ATG4B-219ENST00000479941 PABPC1L2AQ5JQF8 200 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 ACSM5Q6NUN0 579 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 ZNF544Q6NX49 715 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 MYPOPQ86VE0 399 aaPredicted RBP9.39□□□□□ -0.91
ATG4B-219ENST00000479941 SLC30A7Q8NEW0 376 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 NUP37Q8NFH4 326 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 PROKR2Q8NFJ6 384 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 OR10H5Q8NGA6 315 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 OR1J2Q8NGS2 313 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 SMAP2Q8WU79 429 aaPredicted RBP9.39□□□□□ -0.91
ATG4B-219ENST00000479941 C11orf40Q8WZ69 217 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 NEUROG1Q92886 237 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 PIGTQ969N2 578 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 FOXN4Q96NZ1 517 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 PRRG3Q9BZD7 231 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 NMNAT2Q9BZQ4 307 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 OR2H1Q9GZK4 316 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 FN3KQ9H479 309 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 EMC7Q9NPA0 242 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 TMEFF2Q9UIK5 374 aaPredicted RBP9.39□□□□□ -0.91
ATG4B-219ENST00000479941 SPEF1Q9Y4P9 236 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 ATP23Q9Y6H3 246 aa9.39□□□□□ -0.91
ATG4B-219ENST00000479941 ANKRD65E5RJM6 399 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 SURF4O15260 269 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 MITFO75030 526 aaPredicted RBP9.38□□□□□ -0.91
ATG4B-219ENST00000479941 ATE1O95260 518 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 MPZL1O95297 269 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 SNAP29O95721 258 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 HLA-DQA2P01906 255 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 SPI1P17947 270 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 CD53P19397 219 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 APOBEC3AP31941 199 aaPredicted RBP9.38□□□□□ -0.91
ATG4B-219ENST00000479941 APLNRP35414 380 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 FABP6P51161 128 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 ALDH3A2P51648 485 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 GALK2Q01415 458 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 TEKQ02763 1124 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 TBC1D28Q2M2D7 210 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 UGT2A3Q6UWM9 527 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 B3GLCTQ6Y288 498 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 PQLC1Q8N2U9 271 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 GJC3Q8NFK1 279 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 SLC26A10Q8NG04 563 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 OR9Q1Q8NGQ5 310 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 MBD6Q96DN6 1003 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 PLEKHA8Q96JA3 519 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 CCL19Q99731 98 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 CIB1Q99828 191 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 C9orf16Q9BUW7 83 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 GRIP2Q9C0E4 1043 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 USE1Q9NZ43 259 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 ASH2LQ9UBL3 628 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 KCNG2Q9UJ96 466 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 NDRG4Q9ULP0 352 aaKnown RBP9.38□□□□□ -0.91
ATG4B-219ENST00000479941 PLEKHA6Q9Y2H5 1048 aa9.38□□□□□ -0.91
ATG4B-219ENST00000479941 RAI1Q7Z5J4 1906 aaPredicted RBP9.37□□□□□ -0.91
ATG4B-219ENST00000479941 ERICH4A6NGS2 130 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 FAM171A2A8MVW0 826 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 VSTM5A8MXK1 200 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 PRR23D1E9PI22 279 aaPredicted RBP9.37□□□□□ -0.91
ATG4B-219ENST00000479941 BAG2O95816 211 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 GPANK1O95872 356 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 TFP02787 698 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 ALPLP05186 524 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 PRR23D2P0DMB1 279 aaPredicted RBP9.37□□□□□ -0.91
ATG4B-219ENST00000479941 COX5BP10606 129 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 ZNF823P16415 610 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 NR4A1P22736 598 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 STOMP27105 288 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 FMO3P31513 532 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 TTKP33981 857 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 RAD23AP54725 363 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 HGFACQ04756 655 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 DAG1Q14118 895 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 SNAPC1Q16533 368 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 AGAP6Q5VW22 663 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 SLX4IPQ5VYV7 408 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 TMEM236Q5W0B7 351 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 DTX2Q86UW9 622 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 FBXL14Q8N1E6 418 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 MUC15Q8N387 334 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 CPEB3Q8NE35 698 aaKnown RBP9.37□□□□□ -0.91
ATG4B-219ENST00000479941 AKR7LQ8NHP1 331 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 TMEM171Q8WVE6 324 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 IGFBPL1Q8WX77 278 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 PTP4A1Q93096 173 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 CDADC1Q9BWV3 514 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 GABARAPL3Q9BY60 117 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 WNT5BQ9H1J7 359 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 CXorf56Q9H5V9 222 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 ZNF442Q9H7R0 627 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 CDH20Q9HBT6 801 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 CA10Q9NS85 328 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 BEX4Q9NWD9 120 aaPredicted RBP9.37□□□□□ -0.91
ATG4B-219ENST00000479941 TVP23BQ9NYZ1 205 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 LAMP3Q9UQV4 416 aa9.37□□□□□ -0.91
ATG4B-219ENST00000479941 POLR1DQ9Y2S0 133 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms