RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 IL19Q9UHD0 177 aa13.49□□□□□ -0.25
DDX56-210ENST00000479440 RNF114Q9Y508 228 aa13.49□□□□□ -0.25
DDX56-210ENST00000479440 IFNL4K9M1U5 179 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 M0R3H8 397 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 KPNA4O00629 521 aaPredicted RBP13.48□□□□□ -0.25
DDX56-210ENST00000479440 TPST2O60704 377 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 SLC2A10O95528 541 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 ASAH2BP0C7U1 165 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 SELEP16581 610 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 SLC6A2P23975 617 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 CDAP32320 146 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 PSG4Q00888 419 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 PAX2Q02962 417 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 BST1Q10588 318 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 SCARB2Q14108 478 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 SLC2A7Q6PXP3 512 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 Q6YL49 198 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 POU5F2Q8N7G0 328 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 AKR7LQ8NHP1 331 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 RAB40AQ8WXH6 277 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 ASB10Q8WXI3 467 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 NABP1Q96AH0 204 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 CHIAQ9BZP6 476 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 ANGPT4Q9Y264 503 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 POMT1Q9Y6A1 747 aa13.48□□□□□ -0.25
DDX56-210ENST00000479440 CPSF4LA6NMK7 179 aaKnown RBP13.47□□□□□ -0.25
DDX56-210ENST00000479440 TRMUO75648 421 aaKnown RBP13.47□□□□□ -0.25
DDX56-210ENST00000479440 WNT2P09544 360 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 ACADSP16219 412 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 HOXB9P17482 250 aaPredicted RBP13.47□□□□□ -0.25
DDX56-210ENST00000479440 AQP1P29972 269 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 MMP16P51512 607 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 ERVK-25P63136 954 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 PSG7Q13046 419 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 TTMPQ5BVD1 217 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 ZNF774Q6NX45 483 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 NLRC3Q7RTR2 1065 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 KLBQ86Z14 1044 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 OR8B3Q8NGG8 313 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 OR9I1Q8NGQ6 314 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 ITLN1Q8WWA0 313 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 NEIL1Q96FI4 390 aaPredicted RBP13.47□□□□□ -0.25
DDX56-210ENST00000479440 MAELQ96JY0 434 aaKnown RBP13.47□□□□□ -0.25
DDX56-210ENST00000479440 FAM71F1Q96KD3 344 aaPredicted RBP13.47□□□□□ -0.25
DDX56-210ENST00000479440 C4orf45Q96LM5 186 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 MAGEB18Q96M61 343 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 OR8B2Q96RD0 313 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 TMEM38AQ9H6F2 299 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 TCF7L1Q9HCS4 588 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 KIF17Q9P2E2 1029 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 MIOXQ9UGB7 285 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 CORO2BQ9UQ03 480 aa13.47□□□□□ -0.25
DDX56-210ENST00000479440 BLOC1S5-TXNDC5H3BN57 136 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 TMEM178BH3BS89 294 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 CLPXO76031 633 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 TSPAN15O95858 294 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 ABHD16AO95870 558 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 KITP10721 976 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 TUBG1P23258 451 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 PCBD1P61457 104 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 CD47Q08722 323 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 SGCAQ16586 387 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 C2orf68Q2NKX9 166 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 ENTPD8Q5MY95 495 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 ZNF620Q6ZNG0 422 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 SSMEM1Q8WWF3 244 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 DYRK2Q92630 601 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 DACT3Q96B18 629 aaPredicted RBP13.46□□□□□ -0.25
DDX56-210ENST00000479440 MPP4Q96JB8 637 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 OR2V2Q96R30 315 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 WFDC6Q9BQY6 131 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 NUDT16L1Q9BRJ7 211 aaKnown RBP13.46□□□□□ -0.25
DDX56-210ENST00000479440 OR2H1Q9GZK4 316 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 WNT5BQ9H1J7 359 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 TUBG2Q9NRH3 451 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 ASH2LQ9UBL3 628 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 NDRG4Q9ULP0 352 aaKnown RBP13.46□□□□□ -0.25
DDX56-210ENST00000479440 SLC7A7Q9UM01 511 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 UGT2A1Q9Y4X1 527 aa13.46□□□□□ -0.25
DDX56-210ENST00000479440 NOTCH1P46531 2555 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 C3orf80F5H4A9 247 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 UBDO15205 165 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 RGS16O15492 202 aaPredicted RBP13.45□□□□□ -0.26
DDX56-210ENST00000479440 F13BP05160 661 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 MELTFP08582 738 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 KITLGP21583 273 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 UGT2B15P54855 530 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 KRTAP10-3P60369 221 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 RPL18Q07020 188 aaKnown RBP13.45□□□□□ -0.26
DDX56-210ENST00000479440 KRT71Q3SY84 523 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 LRIF1Q5T3J3 769 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 SMYD1Q8NB12 490 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 ADAMTS16Q8TE57 1224 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 NSMAFQ92636 917 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 PAIP2Q9BPZ3 127 aaKnown RBP13.45□□□□□ -0.26
DDX56-210ENST00000479440 INIPQ9NRY2 104 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 SLC25A37Q9NYZ2 338 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 TIMM10BQ9Y5J6 103 aa13.45□□□□□ -0.26
DDX56-210ENST00000479440 KIR2DS1A0A191URI9 304 aa13.44□□□□□ -0.26
DDX56-210ENST00000479440 TRAPPC13A5PLN9 417 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms