RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CDK5R2Q13319 367 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF74Q16587 644 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 TAF9Q16594 264 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 MTX3Q5HYI7 312 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 C6orf10Q5SRN2 563 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 CEP85LQ5SZL2 805 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 C10orf128Q5T292 105 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 FIP1L1Q6UN15 594 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 BRD3OSQ6XYD6 125 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 KRT73Q86Y46 540 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 C1orf174Q8IYL3 243 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 C10orf111Q8N326 155 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 TMEM86BQ8N661 226 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 POU5F2Q8N7G0 328 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 NOXO1Q8NFA2 376 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 OR10S1Q8NGN2 331 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 OR9I1Q8NGQ6 314 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 AKR7LQ8NHP1 331 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 NFKBIDQ8NI38 313 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 ABHD4Q8TB40 342 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 GTF2H4Q92759 462 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 NABP1Q96AH0 204 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 SAMD8Q96LT4 415 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF347Q96SE7 839 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 SSBP3Q9BWW4 388 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 MRPL13Q9BYD1 178 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 CHIAQ9BZP6 476 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC19A3Q9BZV2 496 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 PAIP1Q9H074 479 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 WDR55Q9H6Y2 383 aaPredicted RBP4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 RMND5AQ9H871 391 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 MARCH7Q9H992 704 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 TMEM27Q9HBJ8 222 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 SLCO1B3Q9NPD5 702 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 NANSQ9NR45 359 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 TNFRSF19Q9NS68 423 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 ZIM2Q9NZV7 527 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 EIF3KQ9UBQ5 218 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 IL20RAQ9UHF4 553 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 UGT2A1Q9Y4X1 527 aa4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 HUWE1Q7Z6Z7 4374 aaKnown RBP4.29□□□□□ -1.72
SNRNP40-204ENST00000474025 IGKV1D-43A0A0B4J1Z2 117 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 PRORSD1PA6NEY8 169 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 CENPBD1B2RD01 187 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 TMEM178BH3BS89 294 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 M0R3H8 397 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 HDAC3O15379 428 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 PIN1P1O15428 100 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 CHP2O43745 196 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 TIMM8AO60220 97 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 FMO6PO60774 539 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 CLPXO76031 633 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC2A10O95528 541 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 CH25HO95992 272 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 THY1P04216 161 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 CRYBA1P05813 215 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 MELTFP08582 738 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 ASAH2BP0C7U1 165 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 THRBP10828 461 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 RPS2P15880 293 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 TNFRSF1AP19438 455 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 TNFSF4P23510 183 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 AQP1P29972 269 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 CDAP32320 146 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 GDI2P50395 445 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 POLR2JP52435 117 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 PROK1P58294 105 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 RPL15P61313 204 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 ERVK-25P63136 954 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 MRPS34P82930 218 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 CDK6Q00534 326 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 PSG4Q00888 419 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 IFFO1Q0D2I5 559 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 BST1Q10588 318 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 PSG7Q13046 419 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 STX3Q13277 289 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 HLXQ14774 488 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 PDCD1Q15116 288 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 NPTX1Q15818 432 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 BEAN1Q3B7T3 259 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 GCNT6Q5T4J0 391 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 HHATQ5VTY9 493 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 FAM205BPQ63HN1 556 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 REEP3Q6NUK4 255 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF613Q6PF04 617 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 BTNL3Q6UXE8 466 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 LRRN1Q6UXK5 716 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 UNQ6126/PRO20091Q6UXV3 157 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 Q6YL49 198 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 Q6ZPA2 131 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 Q6ZR03 302 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 ZER1Q7Z7L7 766 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 RANBP3LQ86VV4 465 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 TSPYL5Q86VY4 417 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 KLBQ86Z14 1044 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 MSRB3Q8IXL7 192 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 MUC20Q8N307 709 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 FITM2Q8N6M3 262 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 HIPK4Q8NE63 616 aa4.28□□□□□ -1.72
SNRNP40-204ENST00000474025 OR2Z1Q8NG97 314 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms