RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 TREM2Q9NZC2 230 aa10.18□□□□□ -0.78
PTPRF-211ENST00000467464 SIGLEC7Q9Y286 467 aa10.18□□□□□ -0.78
PTPRF-211ENST00000467464 MALRD1Q5VYJ5 2156 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 IGHV1-69-2A0A0G2JMI3 117 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 A0A1W2PPL8 197 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 GSTA4O15217 222 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 PPIHO43447 177 aaKnown RBP10.17□□□□□ -0.78
PTPRF-211ENST00000467464 CDC14BO60729 498 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 IGHV1-46P01743 117 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 SEMG1P04279 462 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 ADH4P08319 380 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 CTLA4P16410 223 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 CCNOP22674 350 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 OMPP47874 163 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 GDI2P50395 445 aaKnown RBP10.17□□□□□ -0.78
PTPRF-211ENST00000467464 SELENOVP59797 346 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 PSME3P61289 254 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 HNRNPA0Q13151 305 aaKnown RBP10.17□□□□□ -0.78
PTPRF-211ENST00000467464 SEC23BQ15437 767 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 ZBED5Q49AG3 693 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 SPRNQ5BIV9 151 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 TMEM154Q6P9G4 183 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 FKBP9P1Q75LS8 142 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 SYT9Q86SS6 491 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 ICA1LQ8NDH6 482 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 SNX33Q8WV41 574 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 RASD2Q96D21 266 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 GPX7Q96SL4 187 aaPredicted RBP10.17□□□□□ -0.78
PTPRF-211ENST00000467464 GPA33Q99795 319 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 C19orf24Q9BVV8 132 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 LRMDAQ9H2I8 198 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 KCNN2Q9H2S1 579 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 POFUT1Q9H488 388 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 EMC7Q9NPA0 242 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 DCAF13Q9NV06 445 aaKnown RBP10.17□□□□□ -0.78
PTPRF-211ENST00000467464 EGFL7Q9UHF1 273 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 GPR160Q9UJ42 338 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 KLHL21Q9UJP4 597 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 TIMM10BQ9Y5J6 103 aa10.17□□□□□ -0.78
PTPRF-211ENST00000467464 TEX13CA0A0J9YWL9 993 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 TRBV4-1A0A0J9YWV2 114 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 PRSS37A4D1T9 235 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 H3BSA7 217 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 DIRAS1O95057 198 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 MSMBP08118 114 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 COX5BP10606 129 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 PRDX6P30041 224 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 ZNF81P51508 661 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 PPP1CBP62140 327 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 ZNF718Q3SXZ3 478 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 HSP90B2PQ58FF3 399 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 FAM209AQ5JX71 171 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 AVPI1Q5T686 147 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 OTPQ5XKR4 325 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 RINLQ6ZS11 566 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 C1orf229Q6ZS94 237 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-211ENST00000467464 USP51Q70EK9 711 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 GLCCI1Q86VQ1 547 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 FAM162AQ96A26 154 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 TMEM186Q96B77 213 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 FAM46AQ96IP4 442 aaKnown RBP10.16□□□□□ -0.78
PTPRF-211ENST00000467464 ZNF570Q96NI8 536 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 ELAC2Q9BQ52 826 aaKnown RBP10.16□□□□□ -0.78
PTPRF-211ENST00000467464 LPAR2Q9HBW0 351 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 NRIP3Q9NQ35 241 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 G6PC2Q9NQR9 355 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 HIF1ANQ9NWT6 349 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 VSX1Q9NZR4 365 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-211ENST00000467464 TMEM5Q9Y2B1 443 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 WIPI2Q9Y4P8 454 aa10.16□□□□□ -0.78
PTPRF-211ENST00000467464 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.15□□□□□ -0.784e-11■■■■□ 23.9
PTPRF-211ENST00000467464 C12orf71A8MTZ7 269 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 NDUFAB1O14561 156 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 AHCYL1O43865 530 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 SNX3O60493 162 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 UBOX5O94941 541 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 NDUFB2O95178 105 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 TXNDC12O95881 172 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 IGHV2-5P01817 119 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 H1F0P07305 194 aaKnown RBP10.15□□□□□ -0.78
PTPRF-211ENST00000467464 CD55P08174 381 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 RHCEP18577 417 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 DRD4P21917 467 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 SDHAP31040 664 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 RPL4P36578 427 aaKnown RBP10.15□□□□□ -0.78
PTPRF-211ENST00000467464 PCBD1P61457 104 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 MVKQ03426 396 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 KRR1Q13601 381 aaKnown RBP10.15□□□□□ -0.78
PTPRF-211ENST00000467464 MOGQ16653 247 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 TSTQ16762 297 aaKnown RBP10.15□□□□□ -0.78
PTPRF-211ENST00000467464 GLYATQ6IB77 296 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 PTCHD4Q6ZW05 846 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 VASH1Q7L8A9 365 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-211ENST00000467464 CYP4Z1Q86W10 505 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 C1orf174Q8IYL3 243 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 RNF148Q8N7C7 305 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 ABHD4Q8TB40 342 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 CMTM5Q96DZ9 223 aa10.15□□□□□ -0.78
PTPRF-211ENST00000467464 RSRC1Q96IZ7 334 aaKnown RBP10.15□□□□□ -0.78
PTPRF-211ENST00000467464 C4orf45Q96LM5 186 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms