RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 IL22RA2Q969J5 263 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 HIPK2Q9H2X6 1198 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 DEC1Q9P2X7 70 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 DNAJB11Q9UBS4 358 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 SH3BGRL2Q9UJC5 107 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 LAMB4A4D0S4 1761 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 DCCP43146 1447 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 NUDT21O43809 227 aaKnown RBP9.46□□□□□ -0.89
LIN54-202ENST00000442461 ALOX5APP20292 161 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 ARHGAP19Q14CB8 494 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 NNATQ16517 81 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 LEMD1Q68G75 181 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 PET117Q6UWS5 81 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 BTNL8Q6UX41 500 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 Q6ZN92 141 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 SLC16A14Q7RTX9 510 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 GRINAQ7Z429 371 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 C22orf15Q8WYQ4 148 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 SLC17A9Q9BYT1 436 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 RNF150Q9ULK6 438 aa9.46□□□□□ -0.89
LIN54-202ENST00000442461 URB1O60287 2271 aaKnown RBP9.46□□□□□ -0.9
LIN54-202ENST00000442461 SPAG17Q6Q759 2223 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.46□□□□□ -0.9
LIN54-202ENST00000442461 TBX19O60806 448 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 B4GALT2O60909 372 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 TMEM11P17152 192 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 CD82P27701 267 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 DUSP1P28562 367 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 NKX2-1P43699 371 aaPredicted RBP9.46□□□□□ -0.9
LIN54-202ENST00000442461 HSD17B7P56937 341 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 CLRN1P58418 232 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 ZNF90Q03938 601 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 ACVR1Q04771 509 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 ZNF345Q14585 488 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 SAPCD1Q5SSQ6 148 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 MRPL2Q5T653 305 aaKnown RBP9.46□□□□□ -0.9
LIN54-202ENST00000442461 ATRAIDQ6UW56 229 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 CPEB2Q7Z5Q1 589 aaKnown RBP9.46□□□□□ -0.9
LIN54-202ENST00000442461 TMEM234Q8WY98 164 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 NINJ1Q92982 152 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 MRPL38Q96DV4 380 aaKnown RBP9.46□□□□□ -0.9
LIN54-202ENST00000442461 LYSMD1Q96S90 227 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 NKX2-4Q9H2Z4 354 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 SEMA6CQ9H3T2 930 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 PLK3Q9H4B4 646 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 WDR76Q9H967 626 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 CSNK1G1Q9HCP0 422 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 CGGBP1Q9UFW8 167 aaPredicted RBP9.46□□□□□ -0.9
LIN54-202ENST00000442461 OR5V1Q9UGF6 321 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 KCNMB2Q9Y691 235 aa9.46□□□□□ -0.9
LIN54-202ENST00000442461 IGKV6D-21A0A0A0MT36 114 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 NPIPA5A0A0B4J1W7 369 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 A0A1B0GTQ1 180 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 LOC390937A0A1W2PQ73 354 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 SLC16A7O60669 478 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 PEX10O60683 326 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ADRA2CP18825 462 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ACKR3P25106 362 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 C2orf76Q3KRA6 126 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 TRIM61Q5EBN2 209 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 FAM71E1Q6IPT2 247 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 CSNK1A1LQ8N752 337 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 OR5L2Q8NGL0 311 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ZNF480Q8WV37 535 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 EMG1Q92979 244 aaKnown RBP9.45□□□□□ -0.9
LIN54-202ENST00000442461 SEH1LQ96EE3 360 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ZNF558Q96NG5 402 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ASB16Q96NS5 453 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ADARB2Q9NS39 739 aaKnown RBP9.45□□□□□ -0.9
LIN54-202ENST00000442461 IL36AQ9UHA7 158 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 LOC102724200A0A096LPH7 203 aaPredicted RBP9.45□□□□□ -0.9
LIN54-202ENST00000442461 FTCDNL1E5RQL4 147 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 PLPP2O43688 288 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 GATMP50440 423 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 HLA-DRB3P79483 266 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 GUCA2AQ02747 115 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ZNF92Q03936 586 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 SUMF1Q8NBK3 374 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 OVCA2Q8WZ82 227 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 LHX4Q969G2 390 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 SDHCQ99643 169 aaPredicted RBP9.45□□□□□ -0.9
LIN54-202ENST00000442461 KCNJ15Q99712 375 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 CA10Q9NS85 328 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 DNMT3BQ9UBC3 853 aaKnown RBP9.45□□□□□ -0.9
LIN54-202ENST00000442461 MYOTQ9UBF9 498 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 K7ERQ8 282 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 TYRP1P17643 537 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 GABRR1P24046 479 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 MPGP29372 298 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 BLVRBP30043 206 aaPredicted RBP9.45□□□□□ -0.9
LIN54-202ENST00000442461 OR3A1P47881 315 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ZNF787Q6DD87 383 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 PRSS54Q6PEW0 395 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 MAMSTRQ6ZN01 415 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ZDHHC22Q8N966 263 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 LMNTD1Q8N9Z9 388 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 PRRX2Q99811 253 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 ZDHHC4Q9NPG8 344 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 DOK5Q9P104 306 aa9.45□□□□□ -0.9
LIN54-202ENST00000442461 KCNK6Q9Y257 313 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms