RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ZNF619Q8N2I2 560 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 LILRB2Q8N423 598 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 COMMD4Q9H0A8 199 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 CST11Q9H112 138 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 RSPH9Q9H1X1 276 aaPredicted RBP15.46■□□□□ 0.06
PTPRA-205ENST00000399903 CHMP1AQ9HD42 196 aaPredicted RBP15.46■□□□□ 0.06
PTPRA-205ENST00000399903 APOBEC3BQ9UH17 382 aaKnown RBP15.46■□□□□ 0.06
PTPRA-205ENST00000399903 ADAM29Q9UKF5 820 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 ETV7Q9Y603 341 aa15.46■□□□□ 0.06
PTPRA-205ENST00000399903 A0A1W2PPH5 198 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 CLN5O75503 358 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 CEACAM5P06731 702 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 MECP2P51608 486 aaKnown RBP15.45■□□□□ 0.06
PTPRA-205ENST00000399903 PRDX1Q06830 199 aaKnown RBP15.45■□□□□ 0.06
PTPRA-205ENST00000399903 SKP2Q13309 424 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 PRAMEF8Q5VWM4 474 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 PRAMEF7Q5VXH5 474 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 BIVMQ86UB2 503 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 RAB42Q8N4Z0 105 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 CLEC1AQ8NC01 280 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 ACBD4Q8NC06 268 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 OR52E1Q8NGJ3 308 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 MENTQ9BUN1 341 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 HAO2Q9NYQ3 351 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 GSKIPQ9P0R6 139 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 TMED7Q9Y3B3 224 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 PCDHGA1Q9Y5H4 931 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 CDC40O60508 579 aaKnown RBP eCLIP15.45■□□□□ 0.06
PTPRA-205ENST00000399903 ARG1P05089 322 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 ACTBP60709 375 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 ACTG1P63261 375 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 ECH1Q13011 328 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 RAB11BQ15907 218 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 DPY19L4Q7Z388 723 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 NRROSQ86YC3 692 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 JAGN1Q8N5M9 183 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 OR2L5Q8NG80 312 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 LMAN2LQ9H0V9 348 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 PHPT1Q9NRX4 125 aaPredicted RBP15.45■□□□□ 0.06
PTPRA-205ENST00000399903 FLRT3Q9NZU0 649 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 LAMP5Q9UJQ1 280 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 KLF8O95600 359 aaPredicted RBP15.45■□□□□ 0.06
PTPRA-205ENST00000399903 DBIP07108 87 aaKnown RBP15.45■□□□□ 0.06
PTPRA-205ENST00000399903 TACSTD2P09758 323 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 NID1P14543 1247 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 CCR4P51679 360 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 PJVKQ0ZLH3 352 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 ANKRD16Q6P6B7 361 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 TCTEX1D2Q8WW35 142 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 PHYHIPLQ96FC7 376 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 SEC11CQ9BY50 192 aa15.45■□□□□ 0.06
PTPRA-205ENST00000399903 RNASEK-C17orf49H0YIS7 233 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 F13BP05160 661 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 GPR143P51810 404 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 TRA2BP62995 288 aaKnown RBP15.44■□□□□ 0.06
PTPRA-205ENST00000399903 TTLL10Q6ZVT0 673 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 SLC35D2Q76EJ3 337 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 ABHD13Q7L211 337 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 ELF4Q99607 663 aaPredicted RBP15.44■□□□□ 0.06
PTPRA-205ENST00000399903 C5orf52A6NGY3 159 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 ZNF888P0CJ79 500 aaPredicted RBP15.44■□□□□ 0.06
PTPRA-205ENST00000399903 CPMP14384 443 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 HOXB2P14652 356 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 FAM24BQ8N5W8 94 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 GATSQ8NAP1 163 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 OR2A1Q8NGT9 310 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 SECTM1Q8WVN6 248 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 PATE1Q8WXA2 126 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 FAM46BQ96A09 425 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 S100PBPQ96BU1 408 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 PIK3IP1Q96FE7 263 aa15.44■□□□□ 0.06
PTPRA-205ENST00000399903 A0A1B0GV90 55 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 SRPX2O60687 465 aaPredicted RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 ITGB2P05107 769 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 RAB6AP20340 208 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 CD1CP29017 333 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 SERPINF1P36955 418 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 S100A10P60903 97 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 RAB2AP61019 212 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 DUSP8Q13202 625 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 EBPQ15125 230 aaKnown RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 SLC22A6Q4U2R8 563 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 HIST1H2BAQ96A08 127 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 RAB7BQ96AH8 199 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 CCDC74AQ96AQ1 378 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 PHB2Q99623 299 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 PCBD2Q9H0N5 130 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 EPHA6Q9UF33 1036 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 CES1P1Q9UKY3 287 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 CARHSP1Q9Y2V2 147 aaKnown RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 TDRD6O60522 2096 aaKnown RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 MAP3K8P41279 467 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 KIR2DL1P43626 348 aaPredicted RBP15.43■□□□□ 0.06
PTPRA-205ENST00000399903 PDZD11Q5EBL8 140 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 POMZP3Q6PJE2 187 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 TAF8Q7Z7C8 310 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 ZNF584Q8IVC4 421 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 GVQW1Q8N7I0 195 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 SEMA6DQ8NFY4 1073 aa15.43■□□□□ 0.06
PTPRA-205ENST00000399903 IER2Q9BTL4 223 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms