RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 CREB3L1Q96BA8 519 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 ARSGQ96EG1 525 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 SGPP1Q9BX95 441 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 PRDM14Q9GZV8 571 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 TSPAN11A1L157 253 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 NKX2-6A6NCS4 301 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 CD79BP40259 229 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 RHEBQ15382 184 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 TP53I3Q53FA7 332 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 USP43Q70EL4 1123 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 OR4X2Q8NGF9 303 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 CMTM2Q8TAZ6 248 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 NANPQ8TBE9 248 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 HAVCR2Q8TDQ0 301 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 LRRC29Q8WV35 223 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 COMMD5Q9GZQ3 224 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 ANKRD19PQ9H560 264 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 GPR173Q9NS66 373 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 GPR52Q9Y2T5 361 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 IGLV3-27P01718 113 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 SPOCK1Q08629 439 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 STUMQ69YW2 141 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 TOMM5Q8N4H5 51 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 OR8J3Q8NGG0 315 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 AKR7LQ8NHP1 331 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 FIZ1Q96SL8 496 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 KCNJ15Q99712 375 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 ELOVL1Q9BW60 279 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 TXLNGYQ9BZA5 131 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 GSTO2Q9H4Y5 243 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 METTL17Q9H7H0 456 aaPredicted RBP8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 MED17Q9NVC6 651 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 C15orf41Q9Y2V0 281 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 SCN9AQ15858 1988 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 GAPDHSO14556 408 aaPredicted RBP8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 ST8SIA5O15466 376 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 EDF1O60869 148 aaKnown RBP8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 PAX6P26367 422 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 TMEM215Q68D42 235 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 ZNF322Q6U7Q0 402 aaPredicted RBP8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 TUSC5Q8IXB3 177 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 OR51D1Q8NGF3 324 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 OR4C13Q8NGP0 309 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 ACPTQ9BZG2 426 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 UCK1Q9HA47 277 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 ELOVL5Q9NYP7 299 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 A0A1B0GWA3 101 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 DHHO43323 396 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 AZGP1P25311 298 aaKnown RBP8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 LCN1P31025 176 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 GMPRP36959 345 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 FAM76BQ5HYJ3 339 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 KANK2Q63ZY3 851 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 ADGRF3Q8IZF5 1079 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 CBR4Q8N4T8 237 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 OR4S1Q8NGB4 309 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 LMO3Q8TAP4 145 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 ELP4Q96EB1 424 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 POM121Q96HA1 1249 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 MED30Q96HR3 178 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 PRRC1Q96M27 445 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 ATPIF1Q9UII2 106 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 RAB26Q9ULW5 256 aa8.32□□□□□ -1.08
LIMCH1-202ENST00000381753 M0R135 149 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 CCNKO75909 580 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 IFNA1P01562 189 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 GABRA4P48169 554 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 LRRC37A5PQ49AS3 106 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 ISCA2Q86U28 154 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 SLC38A6Q8IZM9 456 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 C17orf50Q8WW18 174 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 FOXRED1Q96CU9 486 aaPredicted RBP8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 ZNF799Q96GE5 643 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 REEP6Q96HR9 211 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 GLIPR2Q9H4G4 154 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 WDR76Q9H967 626 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 NUDT15Q9NV35 164 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 COA3Q9Y2R0 106 aaPredicted RBP8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 TIAM2Q8IVF5 1701 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 H0YIV9 168 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 K7EQM0 130 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 M0R036 132 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 IFNA7P01567 189 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 GYPBP06028 91 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 HOXD11P31277 338 aaPredicted RBP8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 CAMK2BQ13554 666 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 NUFIP2Q7Z417 695 aaKnown RBP8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 MUC15Q8N387 334 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 OR8H1Q8NGG4 311 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 FCAMRQ8WWV6 532 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 HTRA1Q92743 480 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 SPIN2AQ99865 258 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 SPIN2BQ9BPZ2 258 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 FETUBQ9UGM5 382 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 H3BNX3 289 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 UCHL1P09936 223 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 NID1P14543 1247 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 CELP19835 753 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 GALNSP34059 522 aa8.31□□□□□ -1.08
LIMCH1-202ENST00000381753 DSCR9P59020 149 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms