RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 TRAV40A0A0B4J280 105 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 PLSCR5A0PG75 271 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 RNF13O43567 381 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 ENTPD5O75356 428 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 LYPD3O95274 346 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 PLATP00750 562 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 IGHV3-13P01766 116 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 IGHV2-70P01814 119 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 THY1P04216 161 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 CSNK1A1P48729 337 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 TBC1D28Q2M2D7 210 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 BRD3OSQ6XYD6 125 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 WDR88Q6ZMY6 472 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 SLC35D2Q76EJ3 337 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 PIWIL3Q7Z3Z3 882 aaKnown RBP13.32□□□□□ -0.28
DDX55-202ENST00000354291 OR4D11Q8NGI4 311 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 OR10S1Q8NGN2 331 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 OR1J1Q8NGS3 322 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 MRAPQ8TCY5 172 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 GEMIN6Q8WXD5 167 aaKnown RBP13.32□□□□□ -0.28
DDX55-202ENST00000354291 SH3GL3Q99963 347 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 ZNF426Q9BUY5 554 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 GLTPQ9NZD2 209 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 BAG5Q9UL15 447 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 TENM3Q9P273 2699 aa13.32□□□□□ -0.28
DDX55-202ENST00000354291 BBIP1A8MTZ0 92 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 SASH3O75995 380 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 IFNA14P01570 189 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 UMPSP11172 480 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 MAPRE2Q15555 327 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 ESCO2Q56NI9 601 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 SPRNQ5BIV9 151 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 RABL3Q5HYI8 236 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 VAX1Q5SQQ9 334 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 SPATA46Q5T0L3 261 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 TMEM53Q6P2H8 277 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 ERICH5Q6P6B1 374 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 CALHM3Q86XJ0 350 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 SLC22A24Q8N4F4 322 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 OR1J2Q8NGS2 313 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 LINC01006Q8NI28 216 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 TMEM54Q969K7 222 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 ZNF566Q969W8 418 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 SLC25A44Q96H78 314 aaPredicted RBP13.31□□□□□ -0.28
DDX55-202ENST00000354291 POLR2J2Q9GZM3 115 aaKnown RBP13.31□□□□□ -0.28
DDX55-202ENST00000354291 POLR2J3Q9H1A7 115 aaKnown RBP13.31□□□□□ -0.28
DDX55-202ENST00000354291 LRMDAQ9H2I8 198 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 SH3GLB1Q9Y371 365 aa13.31□□□□□ -0.28
DDX55-202ENST00000354291 KPNA4O00629 521 aaPredicted RBP13.3□□□□□ -0.28
DDX55-202ENST00000354291 CLPXO76031 633 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 ASAH2BP0C7U1 165 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 CCNOP22674 350 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 CRYBA2P53672 197 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 KLF10Q13118 480 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 C2orf68Q2NKX9 166 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 THEM4Q5T1C6 240 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 BTNL3Q6UXE8 466 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 ZNF620Q6ZNG0 422 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 TSPYL5Q86VY4 417 aaPredicted RBP13.3□□□□□ -0.28
DDX55-202ENST00000354291 PCYOX1LQ8NBM8 494 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 UPRTQ96BW1 309 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 FGFR1OP2Q9NVK5 253 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 GID8Q9NWU2 228 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 NOTCH3Q9UM47 2321 aa13.3□□□□□ -0.28
DDX55-202ENST00000354291 ZSCAN5BA6NJL1 495 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 BLOC1S5-TXNDC5H3BN57 136 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 FXYD1O00168 92 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 MRASO14807 208 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 PTHP01270 115 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 MT-ND1P03886 318 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 CSF1P09603 554 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 PPIAL4GP0DN37 164 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 MPV17P39210 176 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 RBM34P42696 430 aaKnown RBP13.29□□□□□ -0.28
DDX55-202ENST00000354291 MMP15P51511 669 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 ZNF718Q3SXZ3 478 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 FAM205BPQ63HN1 556 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 LRRN1Q6UXK5 716 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 Q6YL49 198 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 REC114Q7Z4M0 266 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 NANOGNBQ7Z5D8 188 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 LRRC28Q86X40 367 aaPredicted RBP13.29□□□□□ -0.28
DDX55-202ENST00000354291 C10orf82Q8WW14 230 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 ZNF583Q96ND8 569 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 PRSS27Q9BQR3 290 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 PRDM13Q9H4Q3 707 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 NOX4Q9NPH5 578 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 MEPEQ9NQ76 525 aaPredicted RBP13.29□□□□□ -0.28
DDX55-202ENST00000354291 SAR1AQ9NR31 198 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 TMEM106BQ9NUM4 274 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 IL20RAQ9UHF4 553 aa13.29□□□□□ -0.28
DDX55-202ENST00000354291 LOC100653049A0A140TA62 436 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 IQCMA0A1B0GVH7 501 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 A0A1W2PRG6 482 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 A8MXK9 166 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 DHHO43323 396 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 KRT34O76011 436 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 OR5F1O95221 314 aa13.28□□□□□ -0.28
DDX55-202ENST00000354291 FARS2O95363 451 aaKnown RBP13.28□□□□□ -0.28
DDX55-202ENST00000354291 SNAP29O95721 258 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 318.2 ms