RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PRR23D2P0DMB1 279 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-202ENST00000324340 SLC2A2P11168 524 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-202ENST00000324340 ANXA3P12429 323 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 ZNF708P17019 499 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 POU3F2P20265 443 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-202ENST00000324340 RAB3AP20336 220 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 PAICSP22234 425 aaKnown RBP11.38□□□□□ -0.59
DDX39A-202ENST00000324340 HTR1FP30939 366 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 LHX2P50458 406 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 SLC25A1P53007 311 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 SUCLG1P53597 346 aaKnown RBP11.38□□□□□ -0.59
DDX39A-202ENST00000324340 CDH11P55287 796 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 CLDN15P56746 228 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 CLDN18P56856 261 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 RAC3P60763 192 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 RPL27P61353 136 aaKnown RBP11.38□□□□□ -0.59
DDX39A-202ENST00000324340 FLI1Q01543 452 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-202ENST00000324340 SPHARQ15513 63 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 MED22Q15528 200 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 TSC22D1Q15714 1073 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 ACKR1Q16570 336 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 SOWAHCQ53LP3 525 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-202ENST00000324340 MESTQ5EB52 335 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 NIPAL3Q6P499 406 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 TFAP2EQ6VUC0 442 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 TRILQ7L0X0 811 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 ARIH2OSQ8N7S6 290 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 SDR9C7Q8NEX9 313 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 BBS1Q8NFJ9 593 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 OR4K13Q8NH42 304 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 RELTQ969Z4 430 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 RASD2Q96D21 266 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 OR2M2Q96R28 347 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 HCAR1Q9BXC0 346 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 LDAHQ9H6V9 325 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 HEXA-AS1Q9H8Q6 139 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 SCPEP1Q9HB40 452 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 ABCB9Q9NP78 766 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 MCUBQ9NWR8 336 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 DIMT1Q9UNQ2 313 aaKnown RBP11.38□□□□□ -0.59
DDX39A-202ENST00000324340 MAB21L2Q9Y586 359 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 KIAA1549Q9HCM3 1950 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 FREM3P0C091 2139 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 A0A1W2PQL4 384 aaPredicted RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 OR6C68A6NDL8 312 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 FAM183AA6NL82 134 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 C1QTNF9BB2RNN3 333 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 ZNF814B7Z6K7 855 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 TNFSF11O14788 317 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 IGHG3P01860 377 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 C1QTNF9P0C862 333 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 HSMCR30P0CW71 290 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 HLA-DOBP13765 273 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 FGF9P31371 208 aaPredicted RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 CDKN2AP42771 156 aaKnown RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 STARP49675 285 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 DAP3P51398 398 aaKnown RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 HSF1Q00613 529 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 SCRN3Q0VDG4 424 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 POU4F3Q15319 338 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 KLHL22Q53GT1 634 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 ZMAT1Q5H9K5 638 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 CLVS2Q5SYC1 327 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 HBMQ6B0K9 141 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 RPUSD3Q6P087 351 aaKnown RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 MEPCEQ7L2J0 689 aaKnown RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 OR8H3Q8N146 312 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 NANOGP1Q8N7R0 232 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 RBMXL3Q8N7X1 1067 aaKnown RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 EXD3Q8N9H8 876 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 OR2V1Q8NHB1 315 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 NEIL3Q8TAT5 605 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 ACOT12Q8WYK0 555 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 SMPDL3BQ92485 455 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 KISS1RQ969F8 398 aaPredicted RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 KCTD7Q96MP8 289 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 OXGR1Q96P68 337 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 OR5M11Q96RB7 305 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 NMNAT3Q96T66 252 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 NAA11Q9BSU3 229 aaPredicted RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 GSX2Q9BZM3 304 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 SHARPINQ9H0F6 387 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 MED28Q9H204 178 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 PPIL3Q9H2H8 161 aaKnown RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 SNTG1Q9NSN8 517 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 HAO2Q9NYQ3 351 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 ZNF224Q9NZL3 707 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 H2AFY2Q9P0M6 372 aaPredicted RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 COPZ2Q9P299 210 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 PLEKHB1Q9UF11 243 aaPredicted RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 RASD1Q9Y272 281 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 GSTK1Q9Y2Q3 226 aa11.37□□□□□ -0.59
DDX39A-202ENST00000324340 NOSIPQ9Y314 301 aaKnown RBP11.37□□□□□ -0.59
DDX39A-202ENST00000324340 A6NIZ1 184 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 SLC22A31A6NKX4 558 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 K7EM74 188 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 EIF1AYO14602 144 aaKnown RBP11.36□□□□□ -0.59
DDX39A-202ENST00000324340 VAMP5O95183 116 aa11.36□□□□□ -0.59
DDX39A-202ENST00000324340 PLGP00747 810 aaPredicted RBP11.36□□□□□ -0.59
DDX39A-202ENST00000324340 CPEP16870 476 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms