RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 SLCO1B1Q9Y6L6 691 aa7.83□□□□□ -1.16
CLK1-201ENST00000321356 PCNX3Q9H6A9 2034 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 KIF26BQ2KJY2 2108 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 LOC390937A0A1W2PQ73 354 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 TMEM82A0PJX8 343 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 TLCD2A6NGC4 264 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 C17orf51A8MQB3 221 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 TMEM150CB9EJG8 249 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 C11orf98E9PRG8 122 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 TO15178 435 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 SLC16A7O60669 478 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 RAB3DO95716 219 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 HPP00738 406 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 HLA-DQA2P01906 255 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 SPARCP09486 303 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 GP1BBP13224 206 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 NAGAP17050 411 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 PGCP20142 388 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 RIDAP52758 137 aaKnown RBP7.82□□□□□ -1.16
CLK1-201ENST00000321356 SORDQ00796 357 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 DLX2Q07687 328 aaPredicted RBP7.82□□□□□ -1.16
CLK1-201ENST00000321356 EBPQ15125 230 aaKnown RBP7.82□□□□□ -1.16
CLK1-201ENST00000321356 NR0B2Q15466 257 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 ELAVL1Q15717 326 aaKnown RBP7.82□□□□□ -1.16
CLK1-201ENST00000321356 C1orf100Q5SVJ3 147 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 GLYATL3Q5SZD4 288 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 TMEM205Q6UW68 189 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 ADGRE4PQ86SQ3 457 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 MARCH3Q86UD3 253 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 PDZD9Q8IXQ8 264 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 GALNT16Q8N428 558 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 C12orf45Q8N5I9 185 aaPredicted RBP7.82□□□□□ -1.16
CLK1-201ENST00000321356 OR8S1Q8NH09 359 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 ST8SIA4Q92187 359 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 TSLPQ969D9 159 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 PTX4Q96A99 478 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 FOXN4Q96NZ1 517 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 ZNF587Q96SQ5 575 aaPredicted RBP7.82□□□□□ -1.16
CLK1-201ENST00000321356 NUDT9Q9BW91 350 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 C8orf33Q9H7E9 229 aaPredicted RBP7.82□□□□□ -1.16
CLK1-201ENST00000321356 TAS2R4Q9NYW5 299 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 CKLFQ9UBR5 152 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 RHBDD3Q9Y3P4 386 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 LRP12Q9Y561 859 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 MRPS18BQ9Y676 258 aaKnown RBP7.82□□□□□ -1.16
CLK1-201ENST00000321356 PCDH15Q96QU1 1955 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 FREM3P0C091 2139 aa7.82□□□□□ -1.16
CLK1-201ENST00000321356 TMED7-TICAM2A0A0A6YYA0 188 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 MEGF11A6BM72 1044 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 SHISA7A6NL88 538 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 M0QYG6 137 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 PLPP3O14495 311 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 RAD1O60671 282 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 SLC25A12O75746 678 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 OR6A2O95222 327 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 PLGP00747 810 aaPredicted RBP7.81□□□□□ -1.16
CLK1-201ENST00000321356 ISG15P05161 165 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 MGMTP16455 207 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 IL12BP29460 328 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 POLR2HP52434 150 aaKnown RBP7.81□□□□□ -1.16
CLK1-201ENST00000321356 EFNA3P52797 238 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 GFERP55789 205 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 ADAM8P78325 824 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 MELKQ14680 651 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 ETFDHQ16134 617 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 PCK2Q16822 640 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 CLVS2Q5SYC1 327 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 ATPAF1Q5TC12 328 aaPredicted RBP7.81□□□□□ -1.16
CLK1-201ENST00000321356 C11orf88Q6PI97 169 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 POMZP3Q6PJE2 187 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 C9orf40Q8IXQ3 194 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 ZBTB44Q8NCP5 570 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 OR5M8Q8NGP6 311 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 OR52N5Q8NH56 324 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 SLC39A7Q92504 469 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 KLHDC7BQ96G42 594 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 SLC25A44Q96H78 314 aaPredicted RBP7.81□□□□□ -1.16
CLK1-201ENST00000321356 NKX3-1Q99801 234 aaPredicted RBP7.81□□□□□ -1.16
CLK1-201ENST00000321356 TINAGL1Q9GZM7 467 aaPredicted RBP7.81□□□□□ -1.16
CLK1-201ENST00000321356 NRSN2Q9GZP1 204 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 SLC25A32Q9H2D1 315 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 NKX2-4Q9H2Z4 354 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 LDAHQ9H6V9 325 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 PDE7BQ9NP56 450 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 SOHLH2Q9NX45 425 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 CD207Q9UJ71 328 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 CYP8B1Q9UNU6 501 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 TMED7Q9Y3B3 224 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 RP1P56715 2156 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 A0A0D9SG52 128 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 A0A1W2PPC4 97 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 TCRBV16S1A1N1A0A5B0 115 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 A8MVM7 634 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 D6RAR5 112 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 ADAM10O14672 748 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 NUDT21O43809 227 aaKnown RBP7.81□□□□□ -1.16
CLK1-201ENST00000321356 GMFGO60234 142 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 FADS1O60427 444 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 SDC3O75056 442 aa7.81□□□□□ -1.16
CLK1-201ENST00000321356 ALOX12BO75342 701 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms