RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 DPAGT1Q9H3H5 408 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 STEAP1Q9UHE8 339 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 RAD1O60671 282 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 STK17BO94768 372 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 IGHG1P01857 330 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 SP9P0CG40 484 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 ARSBP15848 533 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 BTCP35070 178 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 P2RY4P51582 365 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 MLF1P58340 268 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 GPR85P60893 370 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 SLC35A1P78382 337 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 DYRK1AQ13627 763 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 TMEM69Q5SWH9 247 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 SLC22A10Q63ZE4 541 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 SERPINA12Q8IW75 414 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 GTPBP8Q8N3Z3 284 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 NOXO1Q8NFA2 376 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 PAQR8Q8TEZ7 354 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 HAVCR1Q96D42 359 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 SLC25A44Q96H78 314 aaPredicted RBP11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 OXGR1Q96P68 337 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 HS3ST6Q96QI5 342 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 MRPL13Q9BYD1 178 aaKnown RBP11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 STRADBQ9C0K7 418 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 HPF1Q9NWY4 346 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 COPZ2Q9P299 210 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 CKLFQ9UBR5 152 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 PADI1Q9ULC6 663 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 FOXJ3Q9UPW0 622 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 EMC9Q9Y3B6 208 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 LOXL2Q9Y4K0 774 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 N6AMT1Q9Y5N5 214 aa11.55□□□□□ -0.56
SPTLC1-201ENST00000262554 A0A1W2PQ72 361 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 GABARAPH6UMI1 98 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 SULT2B1O00204 365 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 TRAF3IP2O43734 574 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 SRSF10O75494 262 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 H2BFMP0C1H6 154 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 CCL3P10147 92 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 CFPP27918 469 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 LAP3P28838 519 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 GDNFP39905 211 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 MRPS10P82664 201 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 ZNF239Q16600 458 aaKnown RBP11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 LRFN4Q6PJG9 635 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 OR1J4Q8NGS1 313 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 FCAMRQ8WWV6 532 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 C11orf40Q8WZ69 217 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 PPP1R14AQ96A00 147 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 ZNF486Q96H40 463 aaPredicted RBP11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 ZPBPQ9BS86 351 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 AUNIPQ9H7T9 357 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 PLEKHA1Q9HB21 404 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 NUBP2Q9Y5Y2 271 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 WDR87Q6ZQQ6 2873 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 MYO15AQ9UKN7 3530 aa11.54□□□□□ -0.56
SPTLC1-201ENST00000262554 A0A1W2PPL8 197 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 AQP7P3A6NL99 342 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 TTLL8A6PVC2 850 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 ECDO95905 644 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 DHFRP00374 187 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 PGA4P0DJD7 388 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 PGA3P0DJD8 388 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 ICAM2P13598 275 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 LIFP15018 202 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 ZNF43P17038 809 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 DSCR4P56555 118 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 AP3S2P59780 193 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 SNTB2Q13425 540 aaKnown RBP11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 CAMK2DQ13557 499 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 KLF9Q13886 244 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 C6orf15Q6UXA7 325 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 ZNF704Q6ZNC4 412 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 OR6X1Q8NH79 312 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 RNF133Q8WVZ7 376 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 ASB5Q8WWX0 329 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 DMRTB1Q96MA1 342 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 OR2B2Q9GZK3 357 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 RANGRFQ9HD47 186 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 SH2D2AQ9NP31 389 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 CENPMQ9NSP4 180 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 DKKL1Q9UK85 242 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 OR52A1Q9UKL2 312 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 FBXL3Q9UKT7 428 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 CDV3Q9UKY7 258 aaKnown RBP11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 HHLA2Q9UM44 414 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 LOC102725191A0A1B0GVB3 256 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 TMEM269A0A1B0GVZ9 245 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 H0YC42 278 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 ATP6V1G1O75348 118 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 KRT33AO76009 404 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 TPPPO94811 219 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 PMS2P2O95744 297 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 TCRBP04435 133 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 ISG15P05161 165 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 ACHEP22303 614 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 CDK2P24941 298 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 GIFP27352 417 aa11.53□□□□□ -0.56
SPTLC1-201ENST00000262554 MNDAP41218 407 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms