RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ZNRF4Q8WWF5 429 aa8.66□□□□□ -1.02
PHGDH-215ENST00000641371 TMEM54Q969K7 222 aa8.66□□□□□ -1.02
PHGDH-215ENST00000641371 DNAJA3Q96EY1 480 aa8.66□□□□□ -1.02
PHGDH-215ENST00000641371 TXNDC15Q96J42 360 aa8.66□□□□□ -1.02
PHGDH-215ENST00000641371 HDHD5Q9BXW7 423 aa8.66□□□□□ -1.02
PHGDH-215ENST00000641371 SMURF1Q9HCE7 757 aa8.66□□□□□ -1.02
PHGDH-215ENST00000641371 SNTG1Q9NSN8 517 aa8.66□□□□□ -1.02
PHGDH-215ENST00000641371 ACOXLQ9NUZ1 547 aa8.66□□□□□ -1.02
PHGDH-215ENST00000641371 PARPBPQ9NWS1 579 aa8.66□□□□□ -1.02
PHGDH-215ENST00000641371 MRPL22Q9NWU5 206 aaKnown RBP8.66□□□□□ -1.02
PHGDH-215ENST00000641371 MRM2Q9UI43 246 aaKnown RBP8.66□□□□□ -1.02
PHGDH-215ENST00000641371 POLR1DQ9Y2S0 133 aa8.66□□□□□ -1.02
PHGDH-215ENST00000641371 ZNF292O60281 2723 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 IGKV3D-15A0A087WSY6 115 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 ISPDA4D126 451 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 TRABD2BA6NFA1 517 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 UPK3AO75631 287 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 UCHL1P09936 223 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 RFPL3SP0C7P2 107 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 OR8G3PP0DMU2 310 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 PRKAR1AP10644 381 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 FCGR2AP12318 317 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 ZNF12P17014 697 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 ZNF708P17019 499 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 EIF1AXP47813 144 aaKnown RBP8.65□□□□□ -1.02
PHGDH-215ENST00000641371 NHLH1Q02575 133 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 CAMK2DQ13557 499 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 DOC2BQ14184 412 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 RNPS1Q15287 305 aaKnown RBP8.65□□□□□ -1.02
PHGDH-215ENST00000641371 MEP1BQ16820 701 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 Q499Y3 187 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 HSD17B12Q53GQ0 312 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 ZMAT1Q5H9K5 638 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 METAP1DQ6UB28 335 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-215ENST00000641371 TMEM91Q6ZNR0 172 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 FCRLAQ7L513 359 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 CEACAM19Q7Z692 300 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 VASH2Q86V25 355 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-215ENST00000641371 MINDY2Q8NBR6 621 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 CCDC54Q8NEL0 328 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 OR2G2Q8NGZ5 317 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 SNIP1Q8TAD8 396 aaKnown RBP8.65□□□□□ -1.02
PHGDH-215ENST00000641371 RNF133Q8WVZ7 376 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 ABTB1Q969K4 478 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-215ENST00000641371 MCHR2Q969V1 340 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 TRMT61AQ96FX7 289 aaKnown RBP8.65□□□□□ -1.02
PHGDH-215ENST00000641371 OR2M2Q96R28 347 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 SMAD5Q99717 465 aaKnown RBP8.65□□□□□ -1.02
PHGDH-215ENST00000641371 ABHD6Q9BV23 337 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 CCDC32Q9BV29 185 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 NELFAQ9H3P2 528 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 ELOVL3Q9HB03 270 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 CYB5R1Q9UHQ9 305 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 CMAHPQ9Y471 501 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 PCDHGA9Q9Y5G4 932 aaKnown RBP8.65□□□□□ -1.02
PHGDH-215ENST00000641371 PMF1-BGLAPU3KQ54 211 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 GVINP1Q7Z2Y8 2422 aa8.65□□□□□ -1.02
PHGDH-215ENST00000641371 ALPK2Q86TB3 2170 aa8.65□□□□□ -1.03
PHGDH-215ENST00000641371 PINLYPA6NC86 204 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 CD8B2A6NJW9 211 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 TTLL8A6PVC2 850 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 ZNF724A8MTY0 619 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 ZNF878C9JN71 531 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 E9PI62 339 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 SMAD9O15198 467 aaKnown RBP8.64□□□□□ -1.03
PHGDH-215ENST00000641371 NKX2-8O15522 239 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 DHHO43323 396 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 CXCL13O43927 109 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 GFRA3O60609 400 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 SLC19A2O60779 497 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 ISG15P05161 165 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 CD2P06729 351 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 QDPRP09417 244 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 H2BFMP0C1H6 154 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 UBCP0CG48 685 aaKnown RBP8.64□□□□□ -1.03
PHGDH-215ENST00000641371 CD8BP10966 210 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 CPN1P15169 458 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 RAB3BP20337 219 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 MSR1P21757 451 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 CALRP27797 417 aaKnown RBP8.64□□□□□ -1.03
PHGDH-215ENST00000641371 LHX2P50458 406 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 MMP16P51512 607 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 CCL11P51671 97 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 HCCSP53701 268 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 CLDN20P56880 219 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 SCAND1P57086 179 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 GRB2P62993 217 aaKnown RBP8.64□□□□□ -1.03
PHGDH-215ENST00000641371 FOXK1P85037 733 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 C19orf57Q0VDD7 668 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 HNRNPA0Q13151 305 aaKnown RBP8.64□□□□□ -1.03
PHGDH-215ENST00000641371 SF3B4Q15427 424 aaKnown RBP eCLIP8.64□□□□□ -1.033e-16■■■■■ 41.5
PHGDH-215ENST00000641371 SOWAHCQ53LP3 525 aaPredicted RBP8.64□□□□□ -1.03
PHGDH-215ENST00000641371 TMEM244Q5VVB8 128 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 IGFL3Q6UXB1 125 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 SYT9Q86SS6 491 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 C20orf196Q8IYI0 205 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 TMEM123Q8N131 208 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 ZADH2Q8N4Q0 377 aa8.64□□□□□ -1.03
PHGDH-215ENST00000641371 ZNF676Q8N7Q3 588 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms