RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 VSX1Q9NZR4 365 aaPredicted RBP12.05□□□□□ -0.48
GGA3-215ENST00000582821 SLC7A8Q9UHI5 535 aa12.05□□□□□ -0.48
GGA3-215ENST00000582821 CMAHPQ9Y471 501 aa12.05□□□□□ -0.48
GGA3-215ENST00000582821 IER3IP1Q9Y5U9 82 aa12.05□□□□□ -0.48
GGA3-215ENST00000582821 NF1P21359 2839 aa12.05□□□□□ -0.48
GGA3-215ENST00000582821 CR1P17927 2039 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 TEX13CA0A0J9YWL9 993 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 IQCMA0A1B0GVH7 501 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 AQP12BA6NM10 295 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 TNFRSF11BO00300 401 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 GYG2O15488 501 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 IDH3BO43837 385 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 SSX4O60224 188 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 RAP2AP10114 183 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 ZNF32P17041 273 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 MSR1P21757 451 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 LAP3P28838 519 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 SLC6A6P31641 620 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 PPOXP50336 477 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 NUDT6P53370 316 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 PCBD1P61457 104 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 RPS23P62266 143 aaKnown RBP12.04□□□□□ -0.48
GGA3-215ENST00000582821 KRR1Q13601 381 aaKnown RBP12.04□□□□□ -0.48
GGA3-215ENST00000582821 PABPC1L2AQ5JQF8 200 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 ZNF770Q6IQ21 691 aaPredicted RBP12.04□□□□□ -0.48
GGA3-215ENST00000582821 PGBD2Q6P3X8 592 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 AQP12AQ8IXF9 295 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 CPEB3Q8NE35 698 aaKnown RBP12.04□□□□□ -0.48
GGA3-215ENST00000582821 MRPL24Q96A35 216 aaKnown RBP12.04□□□□□ -0.48
GGA3-215ENST00000582821 RASD2Q96D21 266 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 LRGUKQ96M69 825 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 SNX18Q96RF0 628 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 REG4Q9BYZ8 158 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 LRMDAQ9H2I8 198 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 CCNB1IP1Q9NPC3 277 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 POLE4Q9NR33 117 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 TIMM10BQ9Y5J6 103 aa12.04□□□□□ -0.48
GGA3-215ENST00000582821 H7C1C5 153 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 KHDRBS3O75525 346 aaKnown RBP12.03□□□□□ -0.48
GGA3-215ENST00000582821 STAMBPO95630 424 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 CSF3P09919 207 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 CTLA4P16410 223 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 CDKN2AP42771 156 aaKnown RBP12.03□□□□□ -0.48
GGA3-215ENST00000582821 RIPPLY3P57055 190 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 LCN6P62502 163 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 PSG4Q00888 419 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 BNIP1Q12981 228 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 ENDOGQ14249 297 aaKnown RBP12.03□□□□□ -0.48
GGA3-215ENST00000582821 GK3PQ14409 553 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 MSMPQ1L6U9 139 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 TBC1D28Q2M2D7 210 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 OR2T5Q6IEZ7 315 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 RPL13AP3Q6NVV1 102 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 PTCHD4Q6ZW05 846 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 OR2T29Q8NH02 315 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 FANK1Q8TC84 345 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 CCDC124Q96CT7 223 aaKnown RBP12.03□□□□□ -0.48
GGA3-215ENST00000582821 POM121L2Q96KW2 1035 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 SMR3AQ99954 134 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 RHNO1Q9BSD3 238 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 OR2H1Q9GZK4 316 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 CDH20Q9HBT6 801 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 IL20RAQ9UHF4 553 aa12.03□□□□□ -0.48
GGA3-215ENST00000582821 A0A1W2PPL8 197 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 C12orf71A8MTZ7 269 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 SOCS2O14508 198 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 GPRIN2O60269 458 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 GASTP01350 101 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 SCG5P05408 212 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 STOMP27105 288 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 APEX1P27695 318 aaKnown RBP12.02□□□□□ -0.49
GGA3-215ENST00000582821 CRABP1P29762 137 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 APLNRP35414 380 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 RAD52P43351 418 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 UCP2P55851 309 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 LSM6P62312 80 aaKnown RBP12.02□□□□□ -0.49
GGA3-215ENST00000582821 HSF2Q03933 536 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 KCNMB1Q16558 191 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 CLEC2AQ6UVW9 174 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 CLEC9AQ6UXN8 241 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 ZNF620Q6ZNG0 422 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 ALDH16A1Q8IZ83 802 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 ADGRG5Q8IZF4 528 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 SVOPLQ8N434 492 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 PAQR4Q8N4S7 273 aaPredicted RBP12.02□□□□□ -0.49
GGA3-215ENST00000582821 NEU4Q8WWR8 484 aaPredicted RBP12.02□□□□□ -0.49
GGA3-215ENST00000582821 SAMD8Q96LT4 415 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 ERMAPQ96PL5 475 aaPredicted RBP12.02□□□□□ -0.49
GGA3-215ENST00000582821 SORCS2Q96PQ0 1159 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 ZNF416Q9BWM5 594 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 CHID1Q9BWS9 393 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 MRPL37Q9BZE1 423 aaKnown RBP12.02□□□□□ -0.49
GGA3-215ENST00000582821 BCL2L14Q9BZR8 327 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 RAB1BQ9H0U4 201 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 WNT5BQ9H1J7 359 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 SYT4Q9H2B2 425 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 MYOZ1Q9NP98 299 aaPredicted RBP12.02□□□□□ -0.49
GGA3-215ENST00000582821 IL20Q9NYY1 176 aa12.02□□□□□ -0.49
GGA3-215ENST00000582821 FN1P02751 2386 aaKnown RBP12.01□□□□□ -0.49
GGA3-215ENST00000582821 RNF223E7ERA6 249 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms