RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 TMEM33P57088 247 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 CTXN1P60606 82 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 RAP1BP61224 184 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 RAP1AP62834 184 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 PRKCDQ05655 676 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 MAD2L1BPQ15013 274 aaPredicted RBP13.86□□□□□ -0.19
DDX55-212ENST00000544738 SGCAQ16586 387 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 IFI44LQ53G44 452 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 ELFN2Q5R3F8 820 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 FAM27BQ5VT28 67 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 TMEM154Q6P9G4 183 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 HACD2Q6Y1H2 254 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 CBLL1Q75N03 491 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 VTCN1Q7Z7D3 282 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 OAFQ86UD1 273 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 NRMQ8IXM6 262 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 PAQR4Q8N4S7 273 aaPredicted RBP13.86□□□□□ -0.19
DDX55-212ENST00000544738 SNX33Q8WV41 574 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 ACOT11Q8WXI4 607 aaPredicted RBP13.86□□□□□ -0.19
DDX55-212ENST00000544738 HDAC2Q92769 488 aaKnown RBP13.86□□□□□ -0.19
DDX55-212ENST00000544738 ZNF696Q9H7X3 374 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 MYEF2Q9P2K5 600 aaKnown RBP13.86□□□□□ -0.19
DDX55-212ENST00000544738 PCDHB10Q9UN67 800 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 UGT2A1Q9Y4X1 527 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 SNX13Q9Y5W8 968 aa13.86□□□□□ -0.19
DDX55-212ENST00000544738 PRKDCP78527 4128 aaKnown RBP13.86□□□□□ -0.19
DDX55-212ENST00000544738 EFCAB9A8MZ26 197 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 IGHMP01871 453 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 MT-ND5P03915 603 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 MAKP20794 623 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 PCMT1P22061 227 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 STOMP27105 288 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 CDAP32320 146 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 GPR6P46095 362 aaPredicted RBP13.85□□□□□ -0.19
DDX55-212ENST00000544738 CDH15P55291 814 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 FMODQ06828 376 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 TOP3AQ13472 1001 aaPredicted RBP13.85□□□□□ -0.19
DDX55-212ENST00000544738 PCGF3Q3KNV8 242 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 AWAT1Q58HT5 328 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 PABPC1L2AQ5JQF8 200 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 SLC25A47Q6Q0C1 308 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 THSD4Q6ZMP0 1018 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 RRM2BQ7LG56 351 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 CYP4Z1Q86W10 505 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 C1orf174Q8IYL3 243 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 ALDH16A1Q8IZ83 802 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 OR51A7Q8NH64 312 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 NSMAFQ92636 917 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 NABP1Q96AH0 204 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 RBM4Q9BWF3 364 aaKnown RBP13.85□□□□□ -0.19
DDX55-212ENST00000544738 ZNF416Q9BWM5 594 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 ANKRD19PQ9H560 264 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 HINT3Q9NQE9 182 aaKnown RBP13.85□□□□□ -0.19
DDX55-212ENST00000544738 MAN2C1Q9NTJ4 1040 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 TAAR3PQ9P1P4 343 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 RHCGQ9UBD6 479 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 EIF3KQ9UBQ5 218 aaKnown RBP13.85□□□□□ -0.19
DDX55-212ENST00000544738 VWFP04275 2813 aa13.85□□□□□ -0.19
DDX55-212ENST00000544738 C17orf100A8MU93 164 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 NME4O00746 187 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 FFAR1O14842 300 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 CLPTM1O96005 669 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 NAT2P11245 290 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 COL8A2P25067 703 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 GSK3BP49841 420 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 DVL1P1P54792 670 aaPredicted RBP13.84□□□□□ -0.19
DDX55-212ENST00000544738 PCBD1P61457 104 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 SCGB2A2Q13296 93 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 CCNIQ14094 377 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 TRIP10Q15642 601 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 C8orf82Q6P1X6 216 aaPredicted RBP13.84□□□□□ -0.19
DDX55-212ENST00000544738 ZNF730Q6ZMV8 503 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 CPEB3Q8NE35 698 aaKnown RBP13.84□□□□□ -0.19
DDX55-212ENST00000544738 CMTM5Q96DZ9 223 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 HSH2DQ96JZ2 352 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 NDEL1Q9GZM8 345 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 OR51B6Q9H340 312 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 NKIRAS2Q9NYR9 191 aa13.84□□□□□ -0.19
DDX55-212ENST00000544738 TRAV27A0A087WT01 109 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 A0A087WUU8 490 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 IGKV1D-43A0A0B4J1Z2 117 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 B4DSR2 109 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 J3KTA2 159 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 SERPINA1P01009 418 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 IGHV3-13P01766 116 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 CST2P09228 141 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 ZNF32P17041 273 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 DRD4P21917 467 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 CCNOP22674 350 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 GDI2P50395 445 aaKnown RBP13.83□□□□□ -0.2
DDX55-212ENST00000544738 NUDT2P50583 147 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 SHQ1Q6PI26 577 aaKnown RBP13.83□□□□□ -0.2
DDX55-212ENST00000544738 TMPRSS11FQ6ZWK6 438 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 MBOAT2Q6ZWT7 520 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 LRRC75AQ8NAA5 344 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 ICA1LQ8NDH6 482 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 OR1J1Q8NGS3 322 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 FAM162AQ96A26 154 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 POM121L2Q96KW2 1035 aa13.83□□□□□ -0.2
DDX55-212ENST00000544738 KCTD14Q9BQ13 255 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms