RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	BGLAP	P02818	100 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	SERPINE2	P07093	398 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	MGMT	P16455	207 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	NMU	P48645	174 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	CRISP3	P54108	245 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	MXD1	Q05195	221 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	SMARCB1	Q12824	385 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	DOC2A	Q14183	400 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	TRAM2	Q15035	370 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	PON3	Q15166	354 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	PSG5	Q15238	335 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	HADH	Q16836	314 aa	Known RBP	2.67	□□□□□ -1.98
RDX-208	ENST00000530085	KCTD19	Q17RG1	926 aa	Predicted RBP	2.67	□□□□□ -1.98
RDX-208	ENST00000530085	KLHL40	Q2TBA0	621 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	TMEM255A	Q5JRV8	349 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	PLCXD3	Q63HM9	321 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	C6orf120	Q7Z4R8	191 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	CAMK2N1	Q7Z7J9	78 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	TTC29	Q8NA56	475 aa	Predicted RBP	2.67	□□□□□ -1.98
RDX-208	ENST00000530085	LKAAEAR1	Q8TD35	194 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	ACTRT1	Q8TDG2	376 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	ISG20	Q96AZ6	181 aa	Known RBP	2.67	□□□□□ -1.98
RDX-208	ENST00000530085	ECHDC3	Q96DC8	303 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	ASB9	Q96DX5	294 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	RNF185	Q96GF1	192 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	DNAJC1	Q96KC8	554 aa	Known RBP	2.67	□□□□□ -1.98
RDX-208	ENST00000530085	ZYG11B	Q9C0D3	744 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	ACTR3C	Q9C0K3	210 aa	Predicted RBP	2.67	□□□□□ -1.98
RDX-208	ENST00000530085	RETN	Q9HD89	108 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	KCNJ16	Q9NPI9	418 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	AHSP	Q9NZD4	102 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	STOX2	Q9P2F5	926 aa	Predicted RBP	2.67	□□□□□ -1.98
RDX-208	ENST00000530085	RPS6KB2	Q9UBS0	482 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	ST3GAL6	Q9Y274	331 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	MRPS18B	Q9Y676	258 aa	Known RBP	2.67	□□□□□ -1.98
RDX-208	ENST00000530085	ZNF646	O15015	1829 aa	Predicted RBP	2.67	□□□□□ -1.98
RDX-208	ENST00000530085	COL22A1	Q8NFW1	1626 aa	Predicted RBP	2.67	□□□□□ -1.98
RDX-208	ENST00000530085	NFASC	O94856	1347 aa		2.67	□□□□□ -1.98
RDX-208	ENST00000530085	NKX2-6	A6NCS4	301 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	LYRM9	A8MSI8	78 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085		A8MU10	97 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	LAD1	O00515	517 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	NUPL2	O15504	423 aa	Known RBP	2.66	□□□□□ -1.98
RDX-208	ENST00000530085	AIRE	O43918	545 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	SUPT3H	O75486	399 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	IGLV2-23	P01705	113 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	GNAO1	P09471	354 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	ZDHHC11B	P0C7U3	371 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	POLR2M	P0CAP2	368 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	UBC	P0CG48	685 aa	Known RBP	2.66	□□□□□ -1.98
RDX-208	ENST00000530085	PNMA6A	P0CW24	399 aa	Predicted RBP	2.66	□□□□□ -1.98
RDX-208	ENST00000530085	ZNF30	P17039	623 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	SLC1A2	P43004	574 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	OR1G1	P47890	313 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	NCBP2	P52298	156 aa	Known RBP eCLIP	2.66	□□□□□ -1.98
RDX-208	ENST00000530085	PRPSAP1	Q14558	356 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	OR7A5	Q15622	319 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	TMEM183B	Q1AE95	376 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	RSPO1	Q2MKA7	263 aa	Predicted RBP	2.66	□□□□□ -1.98
RDX-208	ENST00000530085	TTLL9	Q3SXZ7	439 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	BEX5	Q5H9J7	111 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	TTC19	Q6DKK2	380 aa	Predicted RBP	2.66	□□□□□ -1.98
RDX-208	ENST00000530085	OR52W1	Q6IF63	320 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	SPESP1	Q6UW49	350 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	ANGPTL8	Q6UXH0	198 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	TEX43	Q6ZNM6	134 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	ZNF493	Q6ZR52	646 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	ABHD13	Q7L211	337 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	STRADA	Q7RTN6	431 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	HDDC2	Q7Z4H3	204 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	TMEM150A	Q86TG1	271 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	TMEM183A	Q8IXX5	376 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	JAGN1	Q8N5M9	183 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	C8orf31	Q8N9H6	132 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	OR2A1	Q8NGT9	310 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	OR5K2	Q8NHB8	316 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	NUBPL	Q8TB37	319 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	BLOC1S5	Q8TDH9	187 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	GPX8	Q8TED1	209 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	FAM3D	Q96BQ1	224 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	OPALIN	Q96PE5	141 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	UCK2	Q9BZX2	261 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	CLSTN2	Q9H4D0	955 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	NTN4	Q9HB63	628 aa		2.66	□□□□□ -1.98
RDX-208	ENST00000530085	DMAP1	Q9NPF5	467 aa	Predicted RBP	2.66	□□□□□ -1.98
RDX-208	ENST00000530085	PEF1	Q9UBV8	284 aa	Known RBP	2.66	□□□□□ -1.98
RDX-208	ENST00000530085	CIB4	A0PJX0	185 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085	PLAC8L1	A1L4L8	177 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085		A6NDX4	124 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085	TRIM49D1	C9J1S8	452 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085	SMKR1	H3BMG3	65 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085		M0R3G1	203 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085	SCAMP2	O15127	329 aa	Known RBP	2.65	□□□□□ -1.99
RDX-208	ENST00000530085	FKBP6	O75344	327 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085	RAB3D	O95716	219 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085	CTRB1	P17538	263 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085	TUBG1	P23258	451 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085	OR1E1	P30953	314 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085	TNFSF9	P41273	254 aa		2.65	□□□□□ -1.99
RDX-208	ENST00000530085	RPS10	P46783	165 aa	Known RBP	2.65	□□□□□ -1.99

Retrieved 100 of 20,778 RNA–protein pairs in 226.8 ms