RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 HNRNPA0Q13151 305 aaKnown RBP11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 TOP3AQ13472 1001 aaPredicted RBP11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 ANKDD1AQ495B1 522 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 HSP90B2PQ58FF3 399 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 THEM4Q5T1C6 240 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 SHQ1Q6PI26 577 aaKnown RBP11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 ARL9Q6T311 187 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 FKBP9P1Q75LS8 142 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 IGFN1Q86VF2 1251 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 TEX29Q8N6K0 151 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 CPEB3Q8NE35 698 aaKnown RBP11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 YIPF5Q969M3 257 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 C1orf159Q96HA4 380 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 ALG12Q9BV10 488 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 NARFLQ9H6Q4 476 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 ZNF275Q9NSD4 429 aaPredicted RBP11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 NKIRAS2Q9NYR9 191 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 METRNQ9UJH8 293 aa11.46□□□□□ -0.57
CTDSP1-212ENST00000494067 IGLV3-9A0A075B6K5 115 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 PLSCR5A0PG75 271 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 A6NIZ1 184 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 NDUFAB1O14561 156 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 CCDC22O60826 627 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 COX4I1P13073 169 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 CTXN1P60606 82 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 RAP1BP61224 184 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 RPL27P61353 136 aaKnown RBP11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 RAP1AP62834 184 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 CCL8P80075 99 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 TRAM2Q15035 370 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 KRTAP24-1Q3LI83 254 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 ZNF718Q3SXZ3 478 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 PABPC1L2AQ5JQF8 200 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 RINLQ6ZS11 566 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 OAFQ86UD1 273 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 CLDND2Q8NHS1 167 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 RP9Q8TA86 221 aaKnown RBP11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 TIMD4Q96H15 378 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 C19orf24Q9BVV8 132 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 HIF3AQ9Y2N7 669 aa11.45□□□□□ -0.58
CTDSP1-212ENST00000494067 TRAV27A0A087WT01 109 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 IGHV1-69-2A0A0G2JMI3 117 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 C5orf49A4QMS7 147 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 CDC14BO60729 498 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 ZNF682O95780 498 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 SCG5P05408 212 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 MSMBP08118 114 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 ZNF32P17041 273 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 RBMXP38159 391 aaKnown RBP11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 LIPAP38571 399 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 WNT5AP41221 380 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 MAGEB1P43366 347 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 ZNF81P51508 661 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 ARHGDIAP52565 204 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 SLC7A2P52569 658 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 LIPEQ05469 1076 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 HFEQ30201 348 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 FAM209AQ5JX71 171 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 FAM27BQ5VT28 67 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 SLC25A47Q6Q0C1 308 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 TBPL2Q6SJ96 375 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 ZNF730Q6ZMV8 503 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 CYP4Z1Q86W10 505 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 RNF113BQ8IZP6 322 aaKnown RBP11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 OR51F2Q8NH61 342 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 TMEM186Q96B77 213 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 RAB39BQ96DA2 213 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 HOPXQ9BPY8 73 aaPredicted RBP11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 OCEL1Q9H607 264 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 SAP30LQ9HAJ7 183 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 ELOVL3Q9HB03 270 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 CYSLTR2Q9NS75 346 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 HIF1ANQ9NWT6 349 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 TIMM10BQ9Y5J6 103 aa11.44□□□□□ -0.58
CTDSP1-212ENST00000494067 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.44□□□□□ -0.585e-8■■■■□ 21.7
CTDSP1-212ENST00000494067 LOC100509620A0A075B734 347 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 A0A1W2PPL8 197 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 C12orf71A8MTZ7 269 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 EFCAB9A8MZ26 197 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 CLDN25C9JDP6 229 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 XKRYO14609 159 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 CDC42EP2O14613 210 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 RP2O75695 350 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 IGHV3-13P01766 116 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 GAAP10253 952 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 NCK1P16333 377 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 RPL4P36578 427 aaKnown RBP11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 MDH1P40925 334 aaKnown RBP11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 CRYBB2P43320 205 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 SLC9A3P48764 834 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 GSK3BP49841 420 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 ERVK-25P63136 954 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 IFI44LQ53G44 452 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 ZMAT1Q5H9K5 638 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 ACSM5Q6NUN0 579 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 PEG10Q86TG7 708 aaKnown RBP11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 NRMQ8IXM6 262 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 ZNF101Q8IZC7 436 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 OFCC1Q8IZS5 231 aa11.43□□□□□ -0.58
CTDSP1-212ENST00000494067 OR13C2Q8NGS9 318 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms