RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 SLC22A31A6NKX4 558 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 HSPB2A8KAH6 182 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 SLC1A7O00341 560 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 LRRTM2O43300 516 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 CDK1P06493 297 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 LYNP07948 512 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 ITGA5P08648 1049 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 RPSAP08865 295 aaKnown RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 OR2T7P0C7T2 308 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 LIMS3P0CW19 117 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 LIMS4P0CW20 117 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 GAAP10253 952 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 PSKH1P11801 424 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 PIPP12273 146 aaPredicted RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 IGHV1-2P23083 117 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 OPRM1P35372 400 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 MAP2K3P46734 347 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 BLVRAP53004 296 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 CDH11P55287 796 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 CDH15P55291 814 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 PER3P56645 1201 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 LSM6P62312 80 aaKnown RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 SIRPAP78324 504 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 MRPS34P82930 218 aaKnown RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 ADORA2A-AS1P86434 159 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 ROR2Q01974 943 aaKnown RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 ZNF85Q03923 595 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 EMX1Q04741 257 aaPredicted RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 ZNF91Q05481 1191 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 RAB40BQ12829 278 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 ENDOGQ14249 297 aaKnown RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 HSPB2Q16082 182 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 GABRA6Q16445 453 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 SGCAQ16586 387 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 MEP1BQ16820 701 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 CEACAM16Q2WEN9 425 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 KRT80Q6KB66 452 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 C1orf229Q6ZS94 237 aaPredicted RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 Q6ZT83 130 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 C22orf34Q6ZV56 151 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 SLC16A9Q7RTY1 509 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 HDDC2Q7Z4H3 204 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 LHFPL3Q86UP9 236 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 GID4Q8IVV7 300 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 SPARTQ8N0X7 666 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 GPR137CQ8N3F9 429 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 ZNF433Q8N7K0 673 aaPredicted RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 CNEP1R1Q8N9A8 125 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 WDR31Q8NA23 367 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 ZNF540Q8NDQ6 660 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 NOXO1Q8NFA2 376 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 OR2T27Q8NH04 317 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 LILRB4Q8NHJ6 448 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 IPCEF1Q8WWN9 437 aaPredicted RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 RND1Q92730 232 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 HTRA1Q92743 480 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 FBXO17Q96EF6 278 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 TMEM80Q96HE8 168 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 ZNF75AQ96N20 296 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 SH3GL3Q99963 347 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 JAM3Q9BX67 310 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 CDCA4Q9BXL8 241 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 YIPF3Q9GZM5 350 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 RACGAP1Q9H0H5 632 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 OPN3Q9H1Y3 402 aaPredicted RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 ZNF696Q9H7X3 374 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 SEC61A2Q9H9S3 476 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 POLE4Q9NR33 117 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 TMEM38BQ9NVV0 291 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 SCN3BQ9NY72 215 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 B3GNT2Q9NY97 397 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 ZNF224Q9NZL3 707 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 CNOT2Q9NZN8 540 aaKnown RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 MALT1Q9UDY8 824 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 CYB5R1Q9UHQ9 305 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 ERRFI1Q9UJM3 462 aaPredicted RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 RALYQ9UKM9 306 aaKnown RBP5.22□□□□□ -1.57
USP39-213ENST00000467885 EMC9Q9Y3B6 208 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 PCDHGB1Q9Y5G3 927 aa5.22□□□□□ -1.57
USP39-213ENST00000467885 DNAJC13O75165 2243 aa5.21□□□□□ -1.57
USP39-213ENST00000467885 EPG5Q9HCE0 2579 aa5.21□□□□□ -1.57
USP39-213ENST00000467885 CFAP46Q8IYW2 2715 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 KRTAP9-6A0A140TA67 174 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 A0A1B0GUH1 482 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 A0A1W2PQL4 384 aaPredicted RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 MAGEA13PA6NCF6 341 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 WIPF3A6NGB9 483 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 SNTNA6NMZ2 147 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 ZNF99A8MXY4 864 aaPredicted RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 PRR32B1ATL7 298 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 MAGEB4O15481 346 aaPredicted RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 AKAP8O43823 692 aaKnown RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 SELENOFO60613 162 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 MRPS14O60783 128 aaKnown RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 FAM20BO75063 409 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 APOL3O95236 402 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 FADS2O95864 444 aaKnown RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 TFAP2AP05549 437 aa5.21□□□□□ -1.58
USP39-213ENST00000467885 MMP7P09237 267 aaPredicted RBP5.21□□□□□ -1.58
USP39-213ENST00000467885 PATE4P0C8F1 98 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms