RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SERPINB1P30740 379 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 MARCKSL1P49006 195 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF84P51523 738 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 RAP1GDS1P52306 607 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 SELENOVP59797 346 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 ARF6P62330 175 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 UBXN1Q04323 297 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 MFGE8Q08431 387 aaPredicted RBP4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 CHIT1Q13231 466 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 PDE7AQ13946 482 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 HIST2H2ACQ16777 129 aaPredicted RBP4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 SYT14P1Q58G82 188 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 PAGE2BQ5JRK9 111 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 C9orf66Q5T8R8 295 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 HIST2H2AA3Q6FI13 130 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 DGAT2L7PQ6IED9 249 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 MED27Q6P2C8 311 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 LYPD2Q6UXB3 125 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 PPP1R21Q6ZMI0 780 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 AAED1Q7RTV5 226 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 PTOV1Q86YD1 416 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 MISPQ8IVT2 679 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF614Q8N883 585 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 RORBQ92753 470 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 TNFRSF14Q92956 283 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 SAMD8Q96LT4 415 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 ALKBH3Q96Q83 286 aaPredicted RBP4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 MTERF1Q99551 399 aaKnown RBP4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 ARHGDIGQ99819 225 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 LMF2Q9BU23 707 aaKnown RBP4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 FRMD8P1Q9BZ68 369 aaPredicted RBP4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 LINC00470Q9BZP3 86 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 CCDC68Q9H2F9 335 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 HIPK2Q9H2X6 1198 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 TAS2R13Q9NYV9 303 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 GRHL1Q9NZI5 618 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 CLN8Q9UBY8 286 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 SLC7A8Q9UHI5 535 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 GTF2A1LQ9UNN4 478 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 TRAPPC4Q9Y296 219 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 CAB39Q9Y376 341 aaPredicted RBP4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 AKR1B15C9JRZ8 316 aaPredicted RBP4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 E7EVH7 732 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 PPP6CO00743 305 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 PRYO14603 147 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 MFN2O95140 757 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 TK1P04183 234 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 H2AFZP0C0S5 128 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 PCNAP12004 261 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 SAA4P35542 130 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 SLC1A2P43004 574 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 SLC1A1P43005 524 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 P2RX1P51575 399 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 SLC12A2P55011 1212 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 PSMD4P55036 377 aaKnown RBP4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 UBASH3AP57075 661 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 NANOS3P60323 173 aaKnown RBP4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 IRF8Q02556 426 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 RASA2Q15283 850 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 MOGQ16653 247 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 TIGD6Q17RP2 521 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF404Q494X3 552 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 KLHL26Q53HC5 615 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 ODF2Q5BJF6 829 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 METTL11BQ5VVY1 283 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 C3orf33Q6P1S2 294 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 H2AFVQ71UI9 128 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 MOGAT3Q86VF5 341 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 PNKDQ8N490 385 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 PTGR2Q8N8N7 351 aaPredicted RBP4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 OR9K2Q8NGE7 335 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 MAIP1Q8WWC4 291 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 C11orf40Q8WZ69 217 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 UBE2E3Q969T4 207 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 ESAMQ96AP7 390 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 TM4SF18Q96CE8 201 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 NKX3-1Q99801 234 aaPredicted RBP4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 MECRQ9BV79 373 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 FAM234AQ9H0X4 552 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 A4GALTQ9NPC4 353 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 SIRT7Q9NRC8 400 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 UBQLN4Q9NRR5 601 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 CTNNAL1Q9UBT7 734 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 MRTO4Q9UKD2 239 aaKnown RBP4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 OARD1Q9Y530 152 aa4.09□□□□□ -1.75
SBDSP1-204ENST00000453858 ZCWPW2A0A1B0GU75 182 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 UPK1AO00322 258 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 FBP2O00757 339 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 PSTPIP1O43586 416 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 FCMRO60667 390 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 RBMXL2O75526 392 aaKnown RBP4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 BRI3O95415 125 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 OTCP00480 354 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 SERPINA5P05154 406 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 KLK1P06870 262 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 PAX6P26367 422 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 IVDP26440 423 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 GTF2E2P29084 291 aaKnown RBP4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 GABRA3P34903 492 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms