RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 OR10G8Q8NGN5 311 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR2T35Q8NGX2 323 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR56B4Q8NH76 319 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 RPLP0P6Q8NHW5 317 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 APOBEC4Q8WW27 367 aaKnown RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 TCTEX1D2Q8WW35 142 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 APH1BQ8WW43 257 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNRF4Q8WWF5 429 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 DNASE2BQ8WZ79 361 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAB7BQ96AH8 199 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 FBXO17Q96EF6 278 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ITCHQ96J02 903 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 DUX3Q96PT4 197 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR4K3Q96R72 315 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 MCCC1Q96RQ3 725 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF382Q96SR6 550 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 PFDN5Q99471 154 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ALKBH7Q9BT30 221 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 EDEM2Q9BV94 578 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 TRIM62Q9BVG3 475 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 CACNG6Q9BXT2 260 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 DPY30Q9C005 99 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ABCG4Q9H172 646 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ANKRD19PQ9H560 264 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ALG9Q9H6U8 611 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 NMUR1Q9HB89 426 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ABCB9Q9NP78 766 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAB9BQ9NP90 201 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM138Q9NPI0 162 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 NUDT15Q9NV35 164 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 GPATCH2LQ9NWQ4 482 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 WRAP73Q9P2S5 460 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF490Q9ULM2 529 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 NDRG2Q9UN36 371 aaKnown RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 RPL36Q9Y3U8 105 aaKnown RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 POLR3HQ9Y535 204 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 CLCA3PQ9Y6N3 262 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 NYNRINQ9P2P1 1898 aaKnown RBP3.84□□□□□ -1.8
HMGB1P16-201ENST00000447155 YLPM1P49750 1951 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 TP53BP1Q12888 1972 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 A0A087WW49 117 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 A0A096LPI6 279 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 TRAV19A0A0A6YYK7 116 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 A0A0U1RQS6 177 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 A0A1B0GUH1 482 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 C13orf42A0A1B0GVH6 325 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 LRRN3E7EW58 273 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 SMLR1H3BR10 107 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 CREBL2O60519 120 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 TPST2O60704 377 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 RAB36O95755 333 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 OTCP00480 354 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 AMBPP02760 352 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 RLN2P04090 185 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 NMBP08949 121 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 HBQ1P09105 142 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 LINC00032P0C843 101 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 SULT1A3P0DMM9 295 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 SULT1A4P0DMN0 295 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 CPN1P15169 458 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 GNB3P16520 340 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 GOT1P17174 413 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 NPR2P20594 1047 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 OGNP20774 298 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 PAICSP22234 425 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 AGTR1P30556 359 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 S100A11P31949 105 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 FAUP35544 74 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC1A3P43003 542 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 KHKP50053 298 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 DAPP51397 102 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 CLCN4P51793 760 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 LBX1P52954 281 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 CDH4P55283 916 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 TAS2R39P59534 338 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 GNB1P62873 340 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 RPL38P63173 70 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 HOXC5Q00444 222 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 ARHGAP1Q07960 439 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 LRRC74AQ0VAA2 488 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 CDH18Q13634 790 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 SPHARQ15513 63 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 MICBQ29980 383 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 PAN3Q58A45 887 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 PAGE3Q5JUK9 113 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 DNLZQ5SXM8 178 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 CELF3Q5SZQ8 465 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 FAM182AQ5T1J6 154 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 KCTD11Q693B1 232 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 APOBEC3HQ6NTF7 200 aaKnown RBP3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC25A47Q6Q0C1 308 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 LCLAT1Q6UWP7 414 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 CASP12Q6UXS9 341 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 GSG1LQ6UXU4 331 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 ZNF730Q6ZMV8 503 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 RNF165Q6ZSG1 346 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 SLC24A5Q71RS6 500 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 KCTD9Q7L273 389 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 GPR142Q7Z601 462 aa3.83□□□□□ -1.8
HMGB1P16-201ENST00000447155 CYP4Z1Q86W10 505 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms