RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	GRINA	Q7Z429	371 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	VTCN1	Q7Z7D3	282 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	DPPA2	Q7Z7J5	298 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CARM1	Q86X55	608 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	LINC00346	Q8IVM7	164 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	UBE2J2	Q8N2K1	259 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FAM71C	Q8NEG0	241 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ATP6V1C2	Q8NEY4	427 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	OR8J1	Q8NGP2	316 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NEIL3	Q8TAT5	605 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	GPR119	Q8TDV5	335 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	GEMIN6	Q8WXD5	167 aa	Known RBP	5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ST8SIA1	Q92185	356 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SMPDL3B	Q92485	455 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	BORCS5	Q969J3	196 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CPNE4	Q96A23	557 aa	Predicted RBP	5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NTNG2	Q96CW9	530 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CLPTM1L	Q96KA5	538 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MRGPRX4	Q96LA9	322 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	BBC3	Q96PG8	261 aa	Predicted RBP	5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MCHR1	Q99705	422 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ARHGDIG	Q99819	225 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZNF559	Q9BR84	538 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	UGT2B28	Q9BY64	529 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CADM1	Q9BY67	442 aa	Known RBP	5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PCDHAC1	Q9H158	963 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ALX4	Q9H161	411 aa	Predicted RBP	5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	METTL9	Q9H1A3	318 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	UBQLN3	Q9H347	655 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZDHHC11	Q9H8X9	412 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	DCAF13	Q9NV06	445 aa	Known RBP	5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ALKBH4	Q9NXW9	302 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CLEC5A	Q9NY25	188 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	H2AFY2	Q9P0M6	372 aa	Predicted RBP	5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NTNG1	Q9Y2I2	539 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SLC6A5	Q9Y345	797 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PRELID3B	Q9Y3B1	194 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FKBP7	Q9Y680	259 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CACNA1B	Q00975	2339 aa		5.53	□□□□□ -1.52
ECHDC1-208	ENST00000436638	OR2M5	A3KFT3	312 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	HELT	A6NFD8	242 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CPSF4L	A6NMK7	179 aa	Known RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	LINC00587	B1AMM8	73 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	NPIPA3	F8WFD2	350 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	FAAH	O00519	579 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	PRRG2	O14669	202 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SLC31A2	O15432	143 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	NUPL2	O15504	423 aa	Known RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	GCM2	O75603	506 aa	Predicted RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	IGHG3	P01860	377 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	DBT	P11182	482 aa	Known RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TNFRSF1B	P20333	461 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CXCR1	P25024	350 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	FKBP2	P26885	142 aa	Known RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CRABP1	P29762	137 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	APOBEC1	P41238	236 aa	Known RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	OR1E2	P47887	323 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	BCAP31	P51572	246 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	POLR2H	P52434	150 aa	Known RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SNU13	P55769	128 aa	Known RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TAS2R41	P59536	307 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	AP3S2	P59780	193 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	HOXC5	Q00444	222 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	FLI1	Q01543	452 aa	Predicted RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TLE1	Q04724	770 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SRY	Q05066	204 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CHRNB3	Q05901	458 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SLC3A1	Q07837	685 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SELENBP1	Q13228	472 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	MADCAM1	Q13477	382 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	OR1Q1	Q15612	314 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	TOMM34	Q15785	309 aa	Predicted RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	FAM189A2	Q15884	450 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SGCB	Q16585	318 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	PLPPR5	Q32ZL2	321 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	IQCC	Q4KMZ1	466 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SPANXN2	Q5MJ10	180 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ZNF324B	Q6AW86	544 aa	Predicted RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ARSK	Q6UWY0	536 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	HDDC2	Q7Z4H3	204 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	SIAH3	Q8IW03	269 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	AQP12A	Q8IXF9	295 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ADGRG5	Q8IZF4	528 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	CDK20	Q8IZL9	346 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ZNF843	Q8N446	348 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	LNX2	Q8N448	690 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	NHLRC2	Q8NBF2	726 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	ST6GALNAC3	Q8NDV1	305 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	GPR32P1	Q8NGA4	272 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	MARC2	Q969Z3	335 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	DDIT4L	Q96D03	193 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	RNFT2	Q96EX2	444 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	PYURF	Q96I23	114 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	C12orf57	Q99622	126 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	FNDC11	Q9BVV2	318 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	DGCR6L	Q9BY27	220 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	POLR2J2	Q9GZM3	115 aa	Known RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	POLR2J3	Q9H1A7	115 aa	Known RBP	5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	GAL3ST2	Q9H3Q3	398 aa		5.52	□□□□□ -1.53
ECHDC1-208	ENST00000436638	POFUT1	Q9H488	388 aa		5.52	□□□□□ -1.53

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