RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 HLA-DOBP13765 273 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 CTLA4P16410 223 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 GTF2E2P29084 291 aaKnown RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 CRABP1P29762 137 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 DSCR4P56555 118 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 HSF1Q00613 529 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 GLYR1Q49A26 553 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 RNFT1Q5M7Z0 435 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 UNQ9370/PRO34162Q6UXP9 181 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 ACOT12Q8WYK0 555 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 KCTD12Q96CX2 325 aaKnown RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 DNAJA3Q96EY1 480 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 WBP1Q96G27 269 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 ATF6BQ99941 703 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 RPH3AQ9Y2J0 694 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 ARPC4-TTLL3A0A0A6YYG9 625 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 ANKRD61A6NGH8 418 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 UCHL1P09936 223 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 ZNF17P17021 662 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 PPP3R1P63098 170 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 ZNF79Q15937 498 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 PCK2Q16822 640 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 ACSM3Q53FZ2 586 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 ZMAT1Q5H9K5 638 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 HBMQ6B0K9 141 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 FDX2Q6P4F2 183 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 SNX29P2Q8IUI4 249 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 OR14L1PQ8NHC6 308 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 CEP19Q96LK0 163 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 SOSTQ9BQB4 213 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 TTYH2Q9BSA4 534 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 ABCB9Q9NP78 766 aa13.46□□□□□ -0.25
SCAF11-204ENST00000395454 MRPL22Q9NWU5 206 aaKnown RBP13.46□□□□□ -0.25
SCAF11-204ENST00000395454 A0A0G2JK05 382 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 CELA3AP09093 270 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 PSKH1P11801 424 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 CALRP27797 417 aaKnown RBP13.45□□□□□ -0.26
SCAF11-204ENST00000395454 SRD5A2P31213 254 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 NANOS3P60323 173 aaKnown RBP13.45□□□□□ -0.26
SCAF11-204ENST00000395454 ROM1Q03395 351 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 HYAL4Q2M3T9 481 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 STEAP3Q658P3 488 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 FAM180AQ6UWF9 173 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 SLC35D2Q76EJ3 337 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 CEACAM19Q7Z692 300 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 YRDCQ86U90 279 aaKnown RBP13.45□□□□□ -0.26
SCAF11-204ENST00000395454 FAM109AQ8N4B1 249 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 FAM83FQ8NEG4 500 aaPredicted RBP13.45□□□□□ -0.26
SCAF11-204ENST00000395454 ASB17Q8WXJ9 295 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 MIB2Q96AX9 1013 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 MAP6Q96JE9 813 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 UBL7Q96S82 380 aaPredicted RBP13.45□□□□□ -0.26
SCAF11-204ENST00000395454 TTTY10Q9BZA0 68 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 ZCCHC4Q9H5U6 513 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 TRBV2A0A0J9YWF9 115 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 TVP23AA6NH52 213 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 H3BML4 177 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 RGS5O15539 181 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 TBX1O43435 398 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 TFPIP10646 304 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 IFNGR1P15260 489 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 PTBP1P26599 531 aaKnown RBP eCLIP13.45□□□□□ -0.263e-7■■■■■ 46.2
SCAF11-204ENST00000395454 THBS2P35442 1172 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 YIF1BQ5BJH7 314 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 TEX30Q5JUR7 227 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 RAET1LQ5VY80 246 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 DPY19L4Q7Z388 723 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 OR5M1Q8NGP8 315 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 MRPL13Q9BYD1 178 aaKnown RBP13.45□□□□□ -0.26
SCAF11-204ENST00000395454 SRRQ9GZT4 340 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 DAPK2Q9UIK4 370 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 LAMP5Q9UJQ1 280 aa13.45□□□□□ -0.26
SCAF11-204ENST00000395454 KIAA1549Q9HCM3 1950 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 NPIPA5E9PKD4 350 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 SLC16A7O60669 478 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 ARL6IP5O75915 188 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 PMS2P2O95744 297 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 CRYABP02511 175 aaKnown RBP13.44□□□□□ -0.26
SCAF11-204ENST00000395454 HRGP04196 525 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 KRT8P05787 483 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 OCM2P0CE71 109 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 OCMP0CE72 109 aaPredicted RBP13.44□□□□□ -0.26
SCAF11-204ENST00000395454 MYL9P24844 172 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 EDNRAP25101 427 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 SHC1P29353 583 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 CAV3P56539 151 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 FOXK1P85037 733 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 POU3F1Q03052 451 aaPredicted RBP13.44□□□□□ -0.26
SCAF11-204ENST00000395454 GLO1Q04760 184 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 C19orf57Q0VDD7 668 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 RIN1Q13671 783 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 MELKQ14680 651 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 SLC10A1Q14973 349 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 TRIM16LQ309B1 348 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 WIPI1Q5MNZ9 446 aaPredicted RBP13.44□□□□□ -0.26
SCAF11-204ENST00000395454 FAM27D1Q5T7N8 215 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 LIPNQ5VXI9 398 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 DNM1P34Q6PK57 102 aa13.44□□□□□ -0.26
SCAF11-204ENST00000395454 METAP1DQ6UB28 335 aaPredicted RBP13.44□□□□□ -0.26
SCAF11-204ENST00000395454 FAM220AQ7Z4H9 259 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms