RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 RHOJQ9H4E5 214 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 XKR8Q9H6D3 395 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 RMND5AQ9H871 391 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 FAM120CQ9NX05 1096 aaKnown RBP4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 IL17CQ9P0M4 197 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 GALPQ9UBC7 116 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 DHCR7Q9UBM7 475 aaKnown RBP4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 PRODH2Q9UF12 536 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 SNX6Q9UNH7 406 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 ABCA2Q9BZC7 2435 aa4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 ANKHD1Q8IWZ3 2542 aaKnown RBP4.35□□□□□ -1.71
RNU4-39P-201ENST00000362455 TNRC6AQ8NDV7 1962 aaKnown RBP4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 TRAV9-2A0A087WT02 112 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 A0A087X0T9 212 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 A0A1B0GU03 582 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 MGAT4DA6NG13 374 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZSCAN5BA6NJL1 495 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 A8MUI8 341 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 PHF1O43189 567 aaPredicted RBP4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 TBX19O60806 448 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 RAMP1O60894 148 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 STX11O75558 287 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 FAM228BP0C875 321 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 PRG2P13727 222 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 H2AFXP16104 143 aaPredicted RBP4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 KDELR1P24390 212 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 SHC1P29353 583 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 PBLDP30039 288 aaPredicted RBP4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 PEBP1P30086 187 aaKnown RBP4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 RPL4P36578 427 aaKnown RBP4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 XIAPP98170 497 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 COX10Q12887 443 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 ART3Q13508 389 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 PDK4Q16654 411 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 MICAQ29983 383 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZNF630Q2M218 657 aaPredicted RBP4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 DEFB110Q30KQ9 67 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 CCBE1Q6UXH8 406 aaPredicted RBP4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 CYS1Q717R9 158 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 COX15Q7KZN9 410 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 ANKRD37Q7Z713 158 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 NT5DC3Q86UY8 548 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 OOSP2Q86WS3 158 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 HIPK1Q86Z02 1210 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZADH2Q8N4Q0 377 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 OR2Y1Q8NGV0 311 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 OR2L2Q8NH16 312 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 PSMF1Q92530 271 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 C12orf66Q96MD2 445 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZNF670Q9BS34 389 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 OR52A5Q9H2C5 316 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 MEAF6Q9HAF1 191 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 TIGARQ9NQ88 270 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 ANAPC7Q9UJX3 599 aa4.34□□□□□ -1.71
RNU4-39P-201ENST00000362455 ZNF469Q96JG9 3925 aaPredicted RBP4.34□□□□□ -1.72
RNU4-39P-201ENST00000362455 PPIAL4CA0A0B4J2A2 164 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 GLYATL1P3A0A0U1RQE8 302 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 SRRM5B3KS81 715 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 E7EQ34 232 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 PPIAL4DF5H284 164 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 SAP18O00422 153 aaKnown RBP4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 LCMT2O60294 686 aaKnown RBP4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF253O75346 499 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 KBTBD11O94819 623 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 PROSCO94903 275 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 GAS8-AS1O95177 125 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 AGTP01019 485 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 CGAP01215 116 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 OPN1LWP04000 364 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 CCDC172P0C7W6 258 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 PPIAL4GP0DN37 164 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 FOLR2P14207 255 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 RPA2P15927 270 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 HTR1EP28566 365 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 SPAM1P38567 509 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 MAGEA5P43359 124 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 ARHGDIBP52566 201 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 EFNA3P52797 238 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 DCDP81605 110 aaKnown RBP4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 OTUD4Q01804 1114 aaKnown RBP4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 MYL5Q02045 173 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 XRCC4Q13426 336 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 IL18R1Q13478 541 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 SLC10A1Q14973 349 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 PDK2Q15119 407 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 NKAIN1Q4KMZ8 207 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 BCL7AQ4VC05 210 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 TEX44Q53QW1 395 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 LGSNQ5TDP6 509 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 PPP1R2P3Q6NXS1 205 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 SPNS3Q6ZMD2 512 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 SHISA6Q6ZSJ9 500 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 RAB43Q86YS6 212 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 TBC1D21Q8IYX1 336 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 ACBD4Q8NC06 268 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZNF485Q8NCK3 441 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 OR11G2Q8NGC1 345 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 BRSK1Q8TDC3 778 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 LCN9Q8WX39 176 aa4.33□□□□□ -1.72
RNU4-39P-201ENST00000362455 ZBED6CLQ96FA7 236 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms