RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 TMEM106AQ96A25 262 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 FGF20Q9NP95 211 aaPredicted RBP14.72□□□□□ -0.05
NPHP3-201ENST00000337331 MMP24Q9Y5R2 645 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 A0A087WUU8 490 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 RFPL4AA6NLU0 287 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 RFPL4AL1F8VTS6 287 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 LCATP04180 440 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 OR8U9P0C7N5 309 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 OR2T7P0C7T2 308 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 MCCD1P59942 119 aaPredicted RBP14.72□□□□□ -0.05
NPHP3-201ENST00000337331 SLC22A6Q4U2R8 563 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 STEAP1BQ6NZ63 245 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 RTL10Q7L3V2 364 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 ABHD12BQ7Z5M8 362 aaPredicted RBP14.72□□□□□ -0.05
NPHP3-201ENST00000337331 MUC20Q8N307 709 aaPredicted RBP14.72□□□□□ -0.05
NPHP3-201ENST00000337331 OR2T27Q8NH04 317 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 ST6GALNAC5Q9BVH7 336 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 UQCC1Q9NVA1 299 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 UBR3Q6ZT12 1888 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 PLSCR5A0PG75 271 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 A6NIZ1 184 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 IDH3GP51553 393 aaPredicted RBP14.72□□□□□ -0.05
NPHP3-201ENST00000337331 FXYD4P59646 89 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 RAP1BP61224 184 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 RAP1AP62834 184 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 ACER2Q5QJU3 275 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 DPY19L4Q7Z388 723 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 NKAIN4Q8IVV8 208 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 OR51T1Q8NGJ9 327 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 TLNRD1Q9H1K6 362 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 ZMAT3Q9HA38 289 aaKnown RBP14.72□□□□□ -0.05
NPHP3-201ENST00000337331 KCNS2Q9ULS6 477 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 ICKQ9UPZ9 632 aa14.72□□□□□ -0.05
NPHP3-201ENST00000337331 COL5A3P25940 1745 aaPredicted RBP14.72□□□□□ -0.05
NPHP3-201ENST00000337331 RNASEK-C17orf49H0YIS7 233 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 BCL2L11O43521 198 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 YIF1AO95070 293 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 GP1BAP07359 652 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 FABP4P15090 132 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 BCL6P41182 706 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 SOHLH1Q5JUK2 328 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 C12orf73Q69YU5 71 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 MFSD12Q6NUT3 480 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 ADAMTSL4Q6UY14 1074 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF709Q8N972 641 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 FAM181AQ8N9Y4 354 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF511Q8NB15 262 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 OR4D9Q8NGE8 314 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 OR6K3Q8NGY3 331 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 HINT3Q9NQE9 182 aaKnown RBP14.71□□□□□ -0.05
NPHP3-201ENST00000337331 ARG1P05089 322 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 CDK2P24941 298 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF611Q8N823 705 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 HHIPQ96QV1 700 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 SIGLEC11Q96RL6 698 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 CNTNAP3Q9BZ76 1288 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 PLA2G12AQ9BZM1 189 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 ZDHHC5Q9C0B5 715 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF160Q9HCG1 818 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 NRIP3Q9NQ35 241 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 COA4Q9NYJ1 87 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 VSX1Q9NZR4 365 aaPredicted RBP14.71□□□□□ -0.05
NPHP3-201ENST00000337331 COL4A1P02462 1669 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 EFCAB7A8K855 629 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 ZNF264O43296 627 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 CPN1P15169 458 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 RAB4BP61018 213 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 POU3F1Q03052 451 aaPredicted RBP14.71□□□□□ -0.05
NPHP3-201ENST00000337331 HPSE2Q8WWQ2 592 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 RRNAD1Q96FB5 475 aaKnown RBP14.71□□□□□ -0.05
NPHP3-201ENST00000337331 KCNJ15Q99712 375 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 LMAN1LQ9HAT1 526 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 PLEK2Q9NYT0 353 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 ADAM18Q9Y3Q7 739 aa14.71□□□□□ -0.05
NPHP3-201ENST00000337331 PMS2P2O95744 297 aa14.71□□□□□ -0.06
NPHP3-201ENST00000337331 PEX11BO96011 259 aa14.71□□□□□ -0.06
NPHP3-201ENST00000337331 QDPRP09417 244 aa14.71□□□□□ -0.06
NPHP3-201ENST00000337331 ZNF25P17030 456 aaPredicted RBP14.71□□□□□ -0.06
NPHP3-201ENST00000337331 DAP3P51398 398 aaKnown RBP14.71□□□□□ -0.06
NPHP3-201ENST00000337331 DUSP3P51452 185 aaPredicted RBP14.71□□□□□ -0.06
NPHP3-201ENST00000337331 UBE2KP61086 200 aa14.71□□□□□ -0.06
NPHP3-201ENST00000337331 TMPPEQ6ZT21 453 aa14.71□□□□□ -0.06
NPHP3-201ENST00000337331 COMTD1Q86VU5 262 aa14.71□□□□□ -0.06
NPHP3-201ENST00000337331 MRPL41Q8IXM3 137 aaKnown RBP14.71□□□□□ -0.06
NPHP3-201ENST00000337331 OR13C9Q8NGT0 318 aa14.71□□□□□ -0.06
NPHP3-201ENST00000337331 SYT3Q9BQG1 590 aa14.71□□□□□ -0.06
NPHP3-201ENST00000337331 WSB2Q9NYS7 404 aaPredicted RBP14.71□□□□□ -0.06
NPHP3-201ENST00000337331 LSM2Q9Y333 95 aaKnown RBP14.71□□□□□ -0.06
NPHP3-201ENST00000337331 A0A1W2PPH5 198 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 SRPX2O60687 465 aaPredicted RBP14.7□□□□□ -0.06
NPHP3-201ENST00000337331 P04436 131 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 EPXP11678 715 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 PAX6P26367 422 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 RBP2P50120 134 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 ACY1Q03154 408 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 ELAVL1Q15717 326 aaKnown RBP14.7□□□□□ -0.06
NPHP3-201ENST00000337331 TMEM64Q6YI46 380 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 ZNF679Q8IYX0 411 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 HCAR1Q9BXC0 346 aa14.7□□□□□ -0.06
NPHP3-201ENST00000337331 DHCR7Q9UBM7 475 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms