RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 DCLRE1CQ96SD1 692 aaKnown RBP8.46□□□□□ -1.06
C11orf54-201ENST00000331239 ZNF649Q9BS31 505 aa8.46□□□□□ -1.06
C11orf54-201ENST00000331239 BCO1Q9HAY6 547 aa8.46□□□□□ -1.06
C11orf54-201ENST00000331239 ZNF71Q9NQZ8 489 aaPredicted RBP8.46□□□□□ -1.06
C11orf54-201ENST00000331239 H2AFY2Q9P0M6 372 aaPredicted RBP8.46□□□□□ -1.06
C11orf54-201ENST00000331239 SPRR3Q9UBC9 169 aa8.46□□□□□ -1.06
C11orf54-201ENST00000331239 COMMD3Q9UBI1 195 aa8.46□□□□□ -1.06
C11orf54-201ENST00000331239 TNFRSF10DQ9UBN6 386 aa8.46□□□□□ -1.06
C11orf54-201ENST00000331239 NPIPA1Q9UND3 350 aa8.46□□□□□ -1.06
C11orf54-201ENST00000331239 SHISA8B8ZZ34 492 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 TNFSF11O14788 317 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 CNOT4O95628 575 aaKnown RBP8.45□□□□□ -1.06
C11orf54-201ENST00000331239 PAICSP22234 425 aaKnown RBP8.45□□□□□ -1.06
C11orf54-201ENST00000331239 CFL1P23528 166 aaKnown RBP8.45□□□□□ -1.06
C11orf54-201ENST00000331239 PTGS2P35354 604 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 SLC25A1P53007 311 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 SUCLG1P53597 346 aaKnown RBP8.45□□□□□ -1.06
C11orf54-201ENST00000331239 CLDN20P56880 219 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 FXYD6P3P58550 94 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 SLC17A1Q14916 467 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 ST3GAL2Q16842 350 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 ZFP69Q49AA0 526 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 LCN1P1Q5VSP4 162 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 TRIQKQ629K1 86 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 NSUN5P2Q63ZY6 315 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 NIPAL3Q6P499 406 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 CNIH2Q6PI25 160 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 ZNF322Q6U7Q0 402 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-201ENST00000331239 FCRLAQ7L513 359 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 FAM122BQ7Z309 247 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 CPOQ8IVL8 374 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 OR5M1Q8NGP8 315 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 OTULINQ96BN8 352 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 IFT27Q9BW83 186 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 TSPAN10Q9H1Z9 355 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-201ENST00000331239 MMP28Q9H239 520 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 DDX28Q9NUL7 540 aaKnown RBP8.45□□□□□ -1.06
C11orf54-201ENST00000331239 ASB6Q9NWX5 421 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 GRHPRQ9UBQ7 328 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 CACNA1GO43497 2377 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 FAM183AA6NL82 134 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 RIIAD1A6NNX1 92 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 BLOC1S5-TXNDC5H3BN57 136 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 RGS13O14921 159 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 RNF13O43567 381 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 ZNF43P17038 809 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 SHC1P29353 583 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 RPL4P36578 427 aaKnown RBP8.45□□□□□ -1.06
C11orf54-201ENST00000331239 RFC3P40938 356 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 AQP2P41181 271 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 ZNF133P52736 654 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-201ENST00000331239 FOXK1P85037 733 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 HSF1Q00613 529 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 PMP22Q01453 160 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 IFITM2Q01629 132 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 BDH1Q02338 343 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 TBRG1Q3YBR2 411 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 SLC35F1Q5T1Q4 408 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 PLBD1Q6P4A8 553 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 KLBQ86Z14 1044 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 RDH10Q8IZV5 341 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 OR51G2Q8NGK0 314 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 OR51A7Q8NH64 312 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 ENKURQ8TC29 256 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 CNTNAP3BQ96NU0 1288 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 ATF6BQ99941 703 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 WACQ9BTA9 647 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 HDHD5Q9BXW7 423 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 CNTNAP3Q9BZ76 1288 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 TP63Q9H3D4 680 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-201ENST00000331239 CLCF1Q9UBD9 225 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 MOKQ9UQ07 419 aa8.45□□□□□ -1.06
C11orf54-201ENST00000331239 A0A1W2PNR3 127 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 HMX3A6NHT5 357 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 SMAD9O15198 467 aaKnown RBP8.44□□□□□ -1.06
C11orf54-201ENST00000331239 CXCL13O43927 109 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 HPGDSO60760 199 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 WISP1O95388 367 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 HLA-DQB1P01920 261 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 SLC2A2P11168 524 aaPredicted RBP8.44□□□□□ -1.06
C11orf54-201ENST00000331239 ZNF3P17036 446 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 GALP22466 123 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 MYL9P24844 172 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 TIMP3P35625 211 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 EIF1AXP47813 144 aaKnown RBP8.44□□□□□ -1.06
C11orf54-201ENST00000331239 CTXN1P60606 82 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 LGALS3BPQ08380 585 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 MADCAM1Q13477 382 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 NDUFA5Q16718 116 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 SLC35D3Q5M8T2 416 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 METAP1DQ6UB28 335 aaPredicted RBP8.44□□□□□ -1.06
C11orf54-201ENST00000331239 ACBD7Q8N6N7 88 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 LRRC17Q8N6Y2 441 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 TMEM99Q8N816 258 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 OR9K2Q8NGE7 335 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 ZNF519Q8TB69 540 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 SNRNP40Q96DI7 357 aaKnown RBP8.44□□□□□ -1.06
C11orf54-201ENST00000331239 GMPPAQ96IJ6 420 aaPredicted RBP8.44□□□□□ -1.06
C11orf54-201ENST00000331239 ST6GAL2Q96JF0 529 aa8.44□□□□□ -1.06
C11orf54-201ENST00000331239 LINC00470Q9BZP3 86 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms