RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 DBP7P36120 742 aaKnown RBP3.6□□□□□ -1.83
snR42snR42 SUL1P38359 859 aa3.6□□□□□ -1.83
snR42snR42 YHL012WP38709 493 aa3.6□□□□□ -1.83
snR42snR42 BOL3P39724 118 aa3.6□□□□□ -1.83
snR42snR42 SPO22P40511 975 aa3.6□□□□□ -1.83
snR42snR42 EPL1P43572 832 aa3.6□□□□□ -1.83
snR42snR42 ENT3P47160 408 aa3.6□□□□□ -1.83
snR42snR42 RPS7BP48164 190 aaKnown RBP3.6□□□□□ -1.83
snR42snR42 ASE1P50275 885 aa3.6□□□□□ -1.83
snR42snR42 YKE2P52553 114 aa3.6□□□□□ -1.83
snR42snR42 SCS3P53012 380 aa3.6□□□□□ -1.83
snR42snR42 BNI5P53890 448 aaKnown RBP3.6□□□□□ -1.83
snR42snR42 CSM3Q04659 317 aa3.6□□□□□ -1.83
snR42snR42 YMR321CQ04898 105 aa3.6□□□□□ -1.83
snR42snR42 PMT7Q06644 662 aa3.6□□□□□ -1.83
snR42snR42 GPI13Q07830 1017 aa3.6□□□□□ -1.83
snR42snR42 TY1A-LR4P0C2I8 440 aaKnown RBP3.59□□□□□ -1.83
snR42snR42 TY1A-DR6P0CX70 440 aa3.59□□□□□ -1.83
snR42snR42 TY1A-ER1P0CX71 440 aa3.59□□□□□ -1.83
snR42snR42 TY1A-LR2P0CX72 440 aa3.59□□□□□ -1.83
snR42snR42 TY1A-PLP0CX73 440 aa3.59□□□□□ -1.83
snR42snR42 TY1A-JR1P0CX74 440 aa3.59□□□□□ -1.83
snR42snR42 TY1A-LR3P0CX75 440 aa3.59□□□□□ -1.83
snR42snR42 TY1A-ML2P0CX76 440 aa3.59□□□□□ -1.83
snR42snR42 TAT2P38967 592 aa3.59□□□□□ -1.83
snR42snR42 MPT5P39016 859 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
snR42snR42 HMF1P40037 129 aaKnown RBP3.59□□□□□ -1.83
snR42snR42 CTR1P49573 406 aa3.59□□□□□ -1.83
snR42snR42 PSP2P50109 593 aaKnown RBP3.59□□□□□ -1.83
snR42snR42 PTA1Q01329 785 aaPredicted RBP3.59□□□□□ -1.83
snR42snR42 MSC2Q03455 724 aa3.59□□□□□ -1.83
snR42snR42 YDR132CQ03900 495 aa3.59□□□□□ -1.83
snR42snR42 CRD1Q07560 283 aa3.59□□□□□ -1.83
snR42snR42 NOB1Q08444 459 aaKnown RBP3.59□□□□□ -1.83
snR42snR42 TY1A-GR1Q12085 440 aa3.59□□□□□ -1.83
snR42snR42 ARP6Q12509 438 aa3.59□□□□□ -1.83
snR42snR42 ATG11Q12527 1178 aa3.59□□□□□ -1.83
snR42snR42 TY1A-PR3Q6Q5H1 440 aaKnown RBP3.59□□□□□ -1.83
snR42snR42 TY1A-OLQ92392 440 aaKnown RBP3.59□□□□□ -1.83
snR42snR42 MYO1P08964 1928 aa3.59□□□□□ -1.83
snR42snR42 UGA4P32837 571 aa3.58□□□□□ -1.84
snR42snR42 GRS1P38088 690 aaKnown RBP3.58□□□□□ -1.84
snR42snR42 RXT2P38255 430 aa3.58□□□□□ -1.84
snR42snR42 CCT3P39077 534 aaKnown RBP3.58□□□□□ -1.84
snR42snR42 ALD5P40047 520 aaKnown RBP3.58□□□□□ -1.84
snR42snR42 PCI8P40512 444 aa3.58□□□□□ -1.84
snR42snR42 BUD6P41697 788 aa3.58□□□□□ -1.84
snR42snR42 AZR1P50080 613 aa3.58□□□□□ -1.84
snR42snR42 MCM6P53091 1017 aaKnown RBP3.58□□□□□ -1.84
snR42snR42 ENV11P53246 860 aa3.58□□□□□ -1.84
snR42snR42 MDR1P53258 950 aa3.58□□□□□ -1.84
snR42snR42 ZPR1P53303 486 aaKnown RBP3.58□□□□□ -1.84
snR42snR42 GDE1Q02979 1223 aa3.58□□□□□ -1.84
snR42snR42 PUS9Q12069 462 aa3.58□□□□□ -1.84
snR42snR42 VPS13Q07878 3144 aa3.57□□□□□ -1.84
snR42snR42 ILV1P00927 576 aaKnown RBP3.57□□□□□ -1.84
snR42snR42 GSY1P23337 708 aa3.57□□□□□ -1.84
snR42snR42 SRO9P25567 434 aaKnown RBP3.57□□□□□ -1.84
snR42snR42 POT1P27796 417 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
snR42snR42 BMH2P34730 273 aaKnown RBP3.57□□□□□ -1.84
snR42snR42 YKL077WP36081 392 aa3.57□□□□□ -1.84
snR42snR42 TVP38P36164 337 aa3.57□□□□□ -1.84
snR42snR42 OPY1P38271 328 aa3.57□□□□□ -1.84
snR42snR42 RPN10P38886 268 aaKnown RBP3.57□□□□□ -1.84
snR42snR42 JHD1P40034 492 aa3.57□□□□□ -1.84
snR42snR42 RSC8P43609 557 aaKnown RBP3.57□□□□□ -1.84
snR42snR42 YGL081WP53156 320 aa3.57□□□□□ -1.84
snR42snR42 CNM67P53865 581 aaKnown RBP3.57□□□□□ -1.84
snR42snR42 OYE2Q03558 400 aaKnown RBP3.57□□□□□ -1.84
snR42snR42 YML020WQ03722 664 aa3.57□□□□□ -1.84
snR42snR42 AIM33Q04516 312 aa3.57□□□□□ -1.84
snR42snR42 YLH47Q06493 454 aa3.57□□□□□ -1.84
snR42snR42 NBL1Q3E7Y6 73 aa3.57□□□□□ -1.84
snR42snR42 UBR2Q07963 1872 aa3.56□□□□□ -1.84
snR42snR42 HSP82P02829 709 aaKnown RBP3.56□□□□□ -1.84
snR42snR42 FLP1P03870 423 aa3.56□□□□□ -1.84
snR42snR42 RNR2P09938 399 aaKnown RBP3.56□□□□□ -1.84
snR42snR42 SWI6P09959 803 aa3.56□□□□□ -1.84
snR42snR42 MATALPHA2P0CY08 210 aa3.56□□□□□ -1.84
snR42snR42 HMLALPHA2P0CY09 210 aa3.56□□□□□ -1.84
snR42snR42 THR4P16120 514 aaKnown RBP3.56□□□□□ -1.84
snR42snR42 CAD1P24813 409 aaKnown RBP3.56□□□□□ -1.84
snR42snR42 SWI4P25302 1093 aaKnown RBP3.56□□□□□ -1.84
snR42snR42 TRM2P33753 639 aa3.56□□□□□ -1.84
snR42snR42 ATG19P35193 415 aa3.56□□□□□ -1.84
snR42snR42 YAR028WP39548 234 aa3.56□□□□□ -1.84
snR42snR42 YEL025CP39991 1188 aa3.56□□□□□ -1.84
snR42snR42 ACF4P47129 309 aa3.56□□□□□ -1.84
snR42snR42 NUT1P53114 1132 aa3.56□□□□□ -1.84
snR42snR42 TPO2P53283 614 aa3.56□□□□□ -1.84
snR42snR42 ORC4P54791 529 aa3.56□□□□□ -1.84
snR42snR42 TRS120Q04183 1289 aa3.56□□□□□ -1.84
snR42snR42 PHM6Q05637 104 aa3.56□□□□□ -1.84
snR42snR42 YLR257WQ06146 321 aaKnown RBP3.56□□□□□ -1.84
snR42snR42 HRK1Q08732 759 aaKnown RBP3.56□□□□□ -1.84
snR42snR42 CEX1Q12453 761 aa3.56□□□□□ -1.84
snR42snR42 MOT1P32333 1867 aa3.56□□□□□ -1.84
snR42snR42 YMR084WA2P2R3 262 aa3.55□□□□□ -1.84
snR42snR42 PGK1P00560 416 aaKnown RBP3.55□□□□□ -1.84
snR42snR42 TUF1P02992 437 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms