RNA–Protein interactions for RNA: YMR044W

IOC4, Transcript of Member of a complex (Isw1b) with Isw1p and Ioc2p, yeast

Gene IOC4, Length 1,428 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC4	YMR044W	PPE1	P38796	400 aa		4.91	□□□□□ -1.62
IOC4	YMR044W	ESL1	P40456	1118 aa		4.91	□□□□□ -1.62
IOC4	YMR044W	ARI1	P53111	347 aa	Known RBP	4.91	□□□□□ -1.62
IOC4	YMR044W	HDA1	P53973	706 aa		4.91	□□□□□ -1.62
IOC4	YMR044W	THI72	Q08579	599 aa		4.91	□□□□□ -1.62
IOC4	YMR044W	ENT1	Q12518	454 aa		4.91	□□□□□ -1.62
IOC4	YMR044W	YBR182C-A	Q8TGU6	64 aa		4.91	□□□□□ -1.62
IOC4	YMR044W	HOP1	P20050	605 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	CYS3	P31373	394 aa	Known RBP	4.9	□□□□□ -1.62
IOC4	YMR044W	SWI3	P32591	825 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	OAF3	P36023	863 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	ABZ1	P37254	787 aa	Predicted RBP	4.9	□□□□□ -1.62
IOC4	YMR044W	MCX1	P38323	520 aa	Predicted RBP	4.9	□□□□□ -1.62
IOC4	YMR044W	PEX7	P39108	375 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	SAW1	P39735	261 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	RAD26	P40352	1085 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	CEP3	P40969	608 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	YFL052W	P43551	465 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	VTC2	P43585	828 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	CIT3	P43635	486 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	MEP3	P53390	489 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	RCM1	P53972	490 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	CEG1	Q01159	459 aa	Predicted RBP	4.9	□□□□□ -1.62
IOC4	YMR044W	CRR1	Q05790	422 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
IOC4	YMR044W	YPL277C	Q08989	487 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	APM4	Q99186	491 aa		4.9	□□□□□ -1.62
IOC4	YMR044W	RPD3	P32561	433 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	AIM26	P32858	118 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	OYE3	P41816	400 aa	Predicted RBP	4.89	□□□□□ -1.63
IOC4	YMR044W	ENV11	P53246	860 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	VIP1	Q06685	1146 aa	Known RBP	4.89	□□□□□ -1.63
IOC4	YMR044W	GRC3	Q07845	632 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	NUR1	Q12066	484 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
IOC4	YMR044W	KCS1	Q12494	1050 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	SPS1	P08458	490 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	RPC82	P32349	654 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	STE13	P33894	931 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	SEG2	P34250	1132 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	SDS22	P36047	338 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	FAT1	P38225	669 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	VPS8	P39702	1274 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	SLN1	P39928	1220 aa	Predicted RBP	4.89	□□□□□ -1.63
IOC4	YMR044W	KAP123	P40069	1113 aa	Known RBP	4.89	□□□□□ -1.63
IOC4	YMR044W	YIL092W	P40497	633 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	CIA1	Q05583	330 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	RPN7	Q06103	429 aa	Known RBP	4.89	□□□□□ -1.63
IOC4	YMR044W	YDR215C	Q12240	137 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	HIF1	Q12373	385 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	Q0142	Q9ZZW4	58 aa		4.89	□□□□□ -1.63
IOC4	YMR044W	RPS9A	O13516	197 aa	Known RBP	4.88	□□□□□ -1.63
IOC4	YMR044W	ATP12	P22135	325 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	YCK2	P23292	546 aa	Known RBP	4.88	□□□□□ -1.63
IOC4	YMR044W	APL1	P27351	700 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	NGG1	P32494	702 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	RPS0A	P32905	252 aa	Known RBP	4.88	□□□□□ -1.63
IOC4	YMR044W	YKR051W	P36142	418 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	SHM2	P37291	469 aa	Known RBP	4.88	□□□□□ -1.63
IOC4	YMR044W	RFC5	P38251	354 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	PTC7	P38797	343 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	GTS1	P40956	396 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	SMK1	P41808	388 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	BNA1	P47096	177 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	MOT3	P54785	490 aa	Known RBP	4.88	□□□□□ -1.63
IOC4	YMR044W	YKR011C	Q02209	353 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	SXM1	Q04175	944 aa	Known RBP	4.88	□□□□□ -1.63
IOC4	YMR044W	YOR059C	Q08448	450 aa	Known RBP	4.88	□□□□□ -1.63
IOC4	YMR044W	TRE1	Q08919	783 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	CWC2	Q12046	339 aa	Predicted RBP	4.88	□□□□□ -1.63
IOC4	YMR044W	YOR022C	Q12204	715 aa		4.88	□□□□□ -1.63
IOC4	YMR044W	RIB2	Q12362	591 aa	Known RBP	4.88	□□□□□ -1.63
IOC4	YMR044W	GFA1	P14742	717 aa	Known RBP	4.87	□□□□□ -1.63
IOC4	YMR044W	PHO3	P24031	467 aa		4.87	□□□□□ -1.63
IOC4	YMR044W	SRP101	P32916	621 aa		4.87	□□□□□ -1.63
IOC4	YMR044W	XRS2	P33301	854 aa		4.87	□□□□□ -1.63
IOC4	YMR044W	SLC1	P33333	303 aa		4.87	□□□□□ -1.63
IOC4	YMR044W	YKR075C	P36155	307 aa		4.87	□□□□□ -1.63
IOC4	YMR044W	SET5	P38890	526 aa	Known RBP	4.87	□□□□□ -1.63
IOC4	YMR044W	RAI1	P53063	387 aa	Known RBP	4.87	□□□□□ -1.63
IOC4	YMR044W	HLR1	Q04429	423 aa		4.87	□□□□□ -1.63
IOC4	YMR044W	EIS1	Q05050	843 aa	Known RBP	4.87	□□□□□ -1.63
IOC4	YMR044W	ARP7	Q12406	477 aa		4.87	□□□□□ -1.63
IOC4	YMR044W	PRC1	P00729	532 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	NUC1	P08466	329 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	MRP7	P12687	371 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	TYE7	P33122	291 aa	Predicted RBP	4.86	□□□□□ -1.63
IOC4	YMR044W	NUP120	P35729	1037 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	APM3	P38153	483 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	SAF1	P38352	637 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	ZIP2	P53061	704 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	GPD1	Q00055	391 aa	Known RBP	4.86	□□□□□ -1.63
IOC4	YMR044W	MRPL13	Q02204	264 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	SSL1	Q04673	461 aa	Predicted RBP	4.86	□□□□□ -1.63
IOC4	YMR044W	OMS1	Q06668	471 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	HAL9	Q12180	1030 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	NSI1	Q12457	570 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	YLR149C	Q99296	730 aa		4.86	□□□□□ -1.63
IOC4	YMR044W	HOM3	P10869	527 aa		4.85	□□□□□ -1.63
IOC4	YMR044W	SAN1	P22470	610 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms