RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeast

Gene YPT6, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT6	YLR262C	Q0142	Q9ZZW4	58 aa		4.87	□□□□□ -1.63
YPT6	YLR262C	STO1	P34160	861 aa	Known RBP	4.86	□□□□□ -1.63
YPT6	YLR262C	YBR053C	P38235	358 aa		4.86	□□□□□ -1.63
YPT6	YLR262C	PCL5	P38794	229 aa		4.86	□□□□□ -1.63
YPT6	YLR262C	ZIP2	P53061	704 aa		4.86	□□□□□ -1.63
YPT6	YLR262C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
YPT6	YLR262C	SRD1	P09007	221 aa		4.85	□□□□□ -1.63
YPT6	YLR262C	GFA1	P14742	717 aa	Known RBP	4.85	□□□□□ -1.63
YPT6	YLR262C	CDC43	P18898	376 aa		4.85	□□□□□ -1.63
YPT6	YLR262C	MTR3	P48240	250 aa	Predicted RBP	4.85	□□□□□ -1.63
YPT6	YLR262C	RIA1	P53893	1110 aa		4.85	□□□□□ -1.63
YPT6	YLR262C	NRG1	Q03125	231 aa		4.85	□□□□□ -1.63
YPT6	YLR262C	RRP14	P36080	434 aa	Known RBP	4.84	□□□□□ -1.63
YPT6	YLR262C	YFL052W	P43551	465 aa		4.84	□□□□□ -1.63
YPT6	YLR262C	UGO1	Q03327	502 aa		4.84	□□□□□ -1.63
YPT6	YLR262C	GPR1	Q12361	961 aa		4.84	□□□□□ -1.63
YPT6	YLR262C	NDJ1	Q12366	352 aa		4.84	□□□□□ -1.63
YPT6	YLR262C	TDP1	P38319	544 aa		4.83	□□□□□ -1.64
YPT6	YLR262C	RPN10	P38886	268 aa	Known RBP	4.83	□□□□□ -1.64
YPT6	YLR262C	YIR042C	P40586	236 aa		4.83	□□□□□ -1.64
YPT6	YLR262C	CAF16	P43569	289 aa		4.83	□□□□□ -1.64
YPT6	YLR262C	UBC9	P50623	157 aa	Predicted RBP	4.83	□□□□□ -1.64
YPT6	YLR262C	SNP1	Q00916	300 aa	Predicted RBP	4.83	□□□□□ -1.64
YPT6	YLR262C	TFB2	Q02939	513 aa		4.83	□□□□□ -1.64
YPT6	YLR262C	YLR149C	Q99296	730 aa		4.83	□□□□□ -1.64
YPT6	YLR262C	YLR415C	O13578	112 aa		4.82	□□□□□ -1.64
YPT6	YLR262C	HCA4	P20448	770 aa	Known RBP	4.82	□□□□□ -1.64
YPT6	YLR262C	MIH1	P23748	554 aa		4.82	□□□□□ -1.64
YPT6	YLR262C	PEX2	P32800	271 aa		4.82	□□□□□ -1.64
YPT6	YLR262C	PPZ2	P33329	710 aa		4.82	□□□□□ -1.64
YPT6	YLR262C	YKR051W	P36142	418 aa		4.82	□□□□□ -1.64
YPT6	YLR262C	MNN1	P39106	762 aa		4.82	□□□□□ -1.64
YPT6	YLR262C	AIM14	P53109	570 aa		4.82	□□□□□ -1.64
YPT6	YLR262C	NPY1	P53164	384 aa		4.82	□□□□□ -1.64
YPT6	YLR262C	IRC13	Q08630	104 aa		4.82	□□□□□ -1.64
YPT6	YLR262C	LAT1	P12695	482 aa	Known RBP	4.81	□□□□□ -1.64
YPT6	YLR262C	KIN3	P22209	435 aa		4.81	□□□□□ -1.64
YPT6	YLR262C	HOG1	P32485	435 aa		4.81	□□□□□ -1.64
YPT6	YLR262C	HIS7	P33734	552 aa	Known RBP	4.81	□□□□□ -1.64
YPT6	YLR262C	NHX1	Q04121	633 aa		4.81	□□□□□ -1.64
YPT6	YLR262C	SUT2	Q12286	268 aa		4.81	□□□□□ -1.64
YPT6	YLR262C	HMG1	P12683	1054 aa		4.8	□□□□□ -1.64
YPT6	YLR262C	DOT6	P40059	670 aa	Known RBP	4.8	□□□□□ -1.64
YPT6	YLR262C	SNM1	P40993	198 aa		4.8	□□□□□ -1.64
YPT6	YLR262C	VPS73	P53142	486 aa	Known RBP	4.8	□□□□□ -1.64
YPT6	YLR262C	SGO1	Q08490	590 aa		4.8	□□□□□ -1.64
YPT6	YLR262C	TGL5	Q12043	749 aa		4.8	□□□□□ -1.64
YPT6	YLR262C	PCL2	P25693	308 aa		4.79	□□□□□ -1.64
YPT6	YLR262C	CBR1	P38626	284 aa	Known RBP	4.79	□□□□□ -1.64
YPT6	YLR262C	SIC1	P38634	284 aa		4.79	□□□□□ -1.64
YPT6	YLR262C	TAH11	P47112	604 aa		4.79	□□□□□ -1.64
YPT6	YLR262C	SSL2	Q00578	843 aa		4.79	□□□□□ -1.64
YPT6	YLR262C	RPN7	Q06103	429 aa	Known RBP	4.79	□□□□□ -1.64
YPT6	YLR262C	SFL1	P20134	766 aa		4.78	□□□□□ -1.64
YPT6	YLR262C	NMD2	P38798	1089 aa	Known RBP	4.78	□□□□□ -1.64
YPT6	YLR262C	FMP52	P40008	231 aa		4.78	□□□□□ -1.64
YPT6	YLR262C	BNA2	P47125	453 aa		4.78	□□□□□ -1.64
YPT6	YLR262C	NOP14	Q99207	810 aa	Known RBP	4.78	□□□□□ -1.64
YPT6	YLR262C	BNR1	P40450	1375 aa		4.78	□□□□□ -1.64
YPT6	YLR262C	ADR1	P07248	1323 aa		4.77	□□□□□ -1.65
YPT6	YLR262C	TUB1	P09733	447 aa	Known RBP	4.77	□□□□□ -1.65
YPT6	YLR262C	HSL7	P38274	827 aa		4.77	□□□□□ -1.65
YPT6	YLR262C	PRP31	P49704	494 aa	Predicted RBP	4.77	□□□□□ -1.65
YPT6	YLR262C	TEL2	P53038	688 aa		4.77	□□□□□ -1.65
YPT6	YLR262C	YBP2	P53169	641 aa		4.77	□□□□□ -1.65
YPT6	YLR262C	ATG33	Q06485	197 aa		4.77	□□□□□ -1.65
YPT6	YLR262C	YLR001C	Q07895	862 aa		4.77	□□□□□ -1.65
YPT6	YLR262C	ATG11	Q12527	1178 aa		4.77	□□□□□ -1.65
YPT6	YLR262C	RPL8A	P17076	256 aa	Known RBP	4.76	□□□□□ -1.65
YPT6	YLR262C	DMC1	P25453	334 aa		4.76	□□□□□ -1.65
YPT6	YLR262C	ILV6	P25605	309 aa	Known RBP	4.76	□□□□□ -1.65
YPT6	YLR262C	SFP1	P32432	683 aa		4.76	□□□□□ -1.65
YPT6	YLR262C	PCM1	P38628	557 aa	Known RBP	4.76	□□□□□ -1.65
YPT6	YLR262C	BCD1	P38772	366 aa		4.76	□□□□□ -1.65
YPT6	YLR262C	RIX1	P38883	763 aa	Predicted RBP	4.76	□□□□□ -1.65
YPT6	YLR262C	YIL166C	P40445	542 aa		4.76	□□□□□ -1.65
YPT6	YLR262C	YNL193W	P53870	558 aa		4.76	□□□□□ -1.65
YPT6	YLR262C	ADE2	P21264	571 aa	Known RBP	4.75	□□□□□ -1.65
YPT6	YLR262C	YBR259W	P38338	688 aa		4.75	□□□□□ -1.65
YPT6	YLR262C	MET13	P53128	600 aa		4.75	□□□□□ -1.65
YPT6	YLR262C	IMO32	P53219	342 aa		4.75	□□□□□ -1.65
YPT6	YLR262C	SDA1	P53313	767 aa	Known RBP	4.75	□□□□□ -1.65
YPT6	YLR262C	ORC4	P54791	529 aa		4.75	□□□□□ -1.65
YPT6	YLR262C	DNM1	P54861	757 aa		4.75	□□□□□ -1.65
YPT6	YLR262C	ARP4	P80428	489 aa		4.75	□□□□□ -1.65
YPT6	YLR262C	HOS4	P40480	1083 aa		4.74	□□□□□ -1.65
YPT6	YLR262C	YJR142W	P47173	342 aa		4.74	□□□□□ -1.65
YPT6	YLR262C	UBC11	P52492	156 aa		4.74	□□□□□ -1.65
YPT6	YLR262C	PCL10	P53124	433 aa		4.74	□□□□□ -1.65
YPT6	YLR262C	TEX1	P53851	422 aa	Known RBP	4.74	□□□□□ -1.65
YPT6	YLR262C	LEE1	Q02799	301 aa	Known RBP	4.74	□□□□□ -1.65
YPT6	YLR262C	GAD1	Q04792	585 aa		4.74	□□□□□ -1.65
YPT6	YLR262C	GIN4	Q12263	1142 aa		4.74	□□□□□ -1.65
YPT6	YLR262C	YHR112C	P38716	378 aa		4.73	□□□□□ -1.65
YPT6	YLR262C	MIP6	P38760	659 aa	Known RBP	4.73	□□□□□ -1.65
YPT6	YLR262C	REV7	P38927	245 aa		4.73	□□□□□ -1.65
YPT6	YLR262C	YAP1802	P53309	568 aa		4.73	□□□□□ -1.65
YPT6	YLR262C	COQ11	Q05892	277 aa		4.73	□□□□□ -1.65
YPT6	YLR262C	GUD1	Q07729	489 aa		4.73	□□□□□ -1.65
YPT6	YLR262C	MNN4	P36044	1178 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 117.9 ms